AIMC Topic: Deep Learning

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AutoTransOP: translating omics signatures without orthologue requirements using deep learning.

NPJ systems biology and applications
The development of therapeutics and vaccines for human diseases requires a systematic understanding of human biology. Although animal and in vitro culture models can elucidate some disease mechanisms, they typically fail to adequately recapitulate hu...

Validation of a deep learning system for the detection of diabetic retinopathy in Indigenous Australians.

The British journal of ophthalmology
BACKGROUND/AIMS: Deep learning systems (DLSs) for diabetic retinopathy (DR) detection show promising results but can underperform in racial and ethnic minority groups, therefore external validation within these populations is critical for health equi...

Opportunities for Improving Glaucoma Clinical Trials via Deep Learning-Based Identification of Patients with Low Visual Field Variability.

Ophthalmology. Glaucoma
PURPOSE: Develop and evaluate the performance of a deep learning model (DLM) that forecasts eyes with low future visual field (VF) variability, and study the impact of using this DLM on sample size requirements for neuroprotective trials.

Unsupervised motion artifact correction of turbo spin-echo MRI using deep image prior.

Magnetic resonance in medicine
PURPOSE: In MRI, motion artifacts can significantly degrade image quality. Motion artifact correction methods using deep neural networks usually required extensive training on large datasets, making them time-consuming and resource-intensive. In this...

Predictive uncertainty in deep learning-based MR image reconstruction using deep ensembles: Evaluation on the fastMRI data set.

Magnetic resonance in medicine
PURPOSE: To estimate pixel-wise predictive uncertainty for deep learning-based MR image reconstruction and to examine the impact of domain shifts and architecture robustness.

DeepNphos: A deep-learning architecture for prediction of N-phosphorylation sites.

Computers in biology and medicine
MOTIVATION: Phosphorylation, a prevalent post-translational modification, plays a crucial role in regulating cellular activities. This process encompasses O-phosphorylation (e.g., phosphoserine) and N-phosphorylation (e.g., phospho-lysine (pK), phosp...

MFD-GDrug: multimodal feature fusion-based deep learning for GPCR-drug interaction prediction.

Methods (San Diego, Calif.)
The accurate identification of drug-protein interactions (DPIs) is crucial in drug development, especially concerning G protein-coupled receptors (GPCRs), which are vital targets in drug discovery. However, experimental validation of GPCR-drug pairin...

Using Deep Learning and B-Splines to Model Blood Vessel Lumen from 3D Images.

Sensors (Basel, Switzerland)
Accurate geometric modeling of blood vessel lumen from 3D images is crucial for vessel quantification as part of the diagnosis, treatment, and monitoring of vascular diseases. Our method, unlike other approaches which assume a circular or elliptical ...

CLINet: A novel deep learning network for ECG signal classification.

Journal of electrocardiology
Machine learning is poised to revolutionize medicine with algorithms that spot cardiac arrhythmia. An automated diagnostic approach can boost the efficacy of diagnosing life-threatening arrhythmia disorders in routine medical procedures. In this pape...