AIMC Topic: Drug Design

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Opportunities and obstacles for deep learning in biology and medicine.

Journal of the Royal Society, Interface
Deep learning describes a class of machine learning algorithms that are capable of combining raw inputs into layers of intermediate features. These algorithms have recently shown impressive results across a variety of domains. Biology and medicine ar...

Machine Learning-Based Modeling of Drug Toxicity.

Methods in molecular biology (Clifton, N.J.)
Toxicity is an important reason for the failure of drug research and development (R&D). The traditional experimental testings for chemical toxicity profile are costly and time-consuming. Therefore, it is attractive to develop the effective and accura...

Prediction of Drug-Plasma Protein Binding Using Artificial Intelligence Based Algorithms.

Combinatorial chemistry & high throughput screening
AIM AND OBJECTIVE: Plasma protein binding (PPB) has vital importance in the characterization of drug distribution in the systemic circulation. Unfavorable PPB can pose a negative effect on clinical development of promising drug candidates. The drug d...

DeepSite: protein-binding site predictor using 3D-convolutional neural networks.

Bioinformatics (Oxford, England)
MOTIVATION: An important step in structure-based drug design consists in the prediction of druggable binding sites. Several algorithms for detecting binding cavities, those likely to bind to a small drug compound, have been developed over the years b...

Prediction of Human Intestinal Absorption of Compounds Using Artificial Intelligence Techniques.

Current drug discovery technologies
BACKGROUND: Information about Pharmacokinetics of compounds is an essential component of drug design and development. Modeling the pharmacokinetic properties require identification of the factors effecting absorption, distribution, metabolism and exc...

Improving Recognition of Antimicrobial Peptides and Target Selectivity through Machine Learning and Genetic Programming.

IEEE/ACM transactions on computational biology and bioinformatics
Growing bacterial resistance to antibiotics is spurring research on utilizing naturally-occurring antimicrobial peptides (AMPs) as templates for novel drug design. While experimentalists mainly focus on systematic point mutations to measure the effec...