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Supporting Prescriptions with Synonym Matching of Section Names in Prospectuses.

Studies in health technology and informatics
The field of medicine still reports errors because of insufficient knowledge or resources, work load or data not available at the right time and place, and this may be fatal for a patient. To improve the healthcare quality, a doctor needs accurate an...

Automated EEG-based screening of depression using deep convolutional neural network.

Computer methods and programs in biomedicine
In recent years, advanced neurocomputing and machine learning techniques have been used for Electroencephalogram (EEG)-based diagnosis of various neurological disorders. In this paper, a novel computer model is presented for EEG-based screening of de...

Complex overlapping concepts: An effective auditing methodology for families of similarly structured BioPortal ontologies.

Journal of biomedical informatics
In previous research, we have demonstrated for a number of ontologies that structurally complex concepts (for different definitions of "complex") in an ontology are more likely to exhibit errors than other concepts. Thus, such complex concepts often ...

Evolutionary image simplification for lung nodule classification with convolutional neural networks.

International journal of computer assisted radiology and surgery
PURPOSE: Understanding decisions of deep learning techniques is important. Especially in the medical field, the reasons for a decision in a classification task are as crucial as the pure classification results. In this article, we propose a new appro...

Machine Learning in Rehabilitation Assessment for Thermal and Heart Rate Data Processing.

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society
Multimodal signal analysis based on sophisticated noninvasive sensors, efficient communication systems, and machine learning, have a rapidly increasing range of different applications. The present paper is devoted to pattern recognition and the analy...

GPU-DAEMON: GPU algorithm design, data management & optimization template for array based big omics data.

Computers in biology and medicine
In the age of ever increasing data, faster and more efficient data processing algorithms are needed. Graphics Processing Units (GPU) are emerging as a cost-effective alternative architecture for high-end computing. The optimal design of GPU algorithm...

Global firing rate contrast enhancement in E/I neuronal networks by recurrent synchronized inhibition.

Chaos (Woodbury, N.Y.)
Inhibitory synchronization is commonly observed and may play some important functional roles in excitatory/inhibitory (E/I) neuronal networks. The firing rate contrast enhancement is a general feature of information processing in sensory pathways, an...

Deepbinner: Demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks.

PLoS computational biology
Multiplexing, the simultaneous sequencing of multiple barcoded DNA samples on a single flow cell, has made Oxford Nanopore sequencing cost-effective for small genomes. However, it depends on the ability to sort the resulting sequencing reads by barco...

A deep learning approach to automate refinement of somatic variant calling from cancer sequencing data.

Nature genetics
Cancer genomic analysis requires accurate identification of somatic variants in sequencing data. Manual review to refine somatic variant calls is required as a final step after automated processing. However, manual variant refinement is time-consumin...