AIMC Topic: Machine Learning

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Disease Classification in Eggplant Using Pre-trained VGG16 and MSVM.

Scientific reports
Currently, the application of deep learning in crop disease classification is one of the active areas of research for which an image dataset is required. Eggplant (Solanum melongena) is one of the important crops, but it is susceptible to serious dis...

Machine learning-aided analyses of thousands of draft genomes reveal specific features of activated sludge processes.

Microbiome
BACKGROUND: Microorganisms in activated sludge (AS) play key roles in the wastewater treatment processes. However, their ecological behaviors and differences from microorganisms in other environments have mainly been studied using the 16S rRNA gene t...

GARS: Genetic Algorithm for the identification of a Robust Subset of features in high-dimensional datasets.

BMC bioinformatics
BACKGROUND: Feature selection is a crucial step in machine learning analysis. Currently, many feature selection approaches do not ensure satisfying results, in terms of accuracy and computational time, when the amount of data is huge, such as in 'Omi...

Machine learning models for net photosynthetic rate prediction using poplar leaf phenotype data.

PloS one
BACKGROUND: As an essential component in reducing anthropogenic CO2 emissions to the atmosphere, tree planting is the key to keeping carbon dioxide emissions under control. In 1992, the United Nations agreed to take action at the Earth Summit to stab...

Fitting prediction rule ensembles to psychological research data: An introduction and tutorial.

Psychological methods
Prediction rule ensembles (PREs) are a relatively new statistical learning method, which aim to strike a balance between predictive performance and interpretability. Starting from a decision tree ensemble, like a boosted tree ensemble or a random for...

Machine learning and ligand binding predictions: A review of data, methods, and obstacles.

Biochimica et biophysica acta. General subjects
Computational predictions of ligand binding is a difficult problem, with more accurate methods being extremely computationally expensive. The use of machine learning for drug binding predictions could possibly leverage the use of biomedical big data ...

Efficient treatment of outliers and class imbalance for diabetes prediction.

Artificial intelligence in medicine
Learning from outliers and imbalanced data remains one of the major difficulties for machine learning classifiers. Among the numerous techniques dedicated to tackle this problem, data preprocessing solutions are known to be efficient and easy to impl...

Discriminating progressive supranuclear palsy from Parkinson's disease using wearable technology and machine learning.

Gait & posture
BACKGROUND: Progressive supranuclear palsy (PSP), a neurodegenerative conditions may be difficult to discriminate clinically from idiopathic Parkinson's disease (PD). It is critical that we are able to do this accurately and as early as possible in o...

Machine learning analysis plans for randomised controlled trials: detecting treatment effect heterogeneity with strict control of type I error.

Trials
BACKGROUND: Retrospective exploratory analyses of randomised controlled trials (RCTs) seeking to identify treatment effect heterogeneity (TEH) are prone to bias and false positives. Yet the desire to learn all we can from exhaustive data measurements...

In silico prediction of blood cholesterol levels from genotype data.

PloS one
In this work we present a framework for blood cholesterol levels prediction from genotype data. The predictor is based on an algorithm for cholesterol metabolism simulation available in literature, implemented and optimized by our group in the R lang...