AIMC Topic: Plants

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Artificial neural networks reveal efficiency in genetic value prediction.

Genetics and molecular research : GMR
The objective of this study was to evaluate the efficiency of artificial neural networks (ANNs) for predicting genetic value in experiments carried out in randomized blocks. Sixteen scenarios were simulated with different values of heritability (10, ...

Construction of an ortholog database using the semantic web technology for integrative analysis of genomic data.

PloS one
Recently, various types of biological data, including genomic sequences, have been rapidly accumulating. To discover biological knowledge from such growing heterogeneous data, a flexible framework for data integration is necessary. Ortholog informati...

Intelligent transformation of ultrasound-assisted novel solvent extraction plant active ingredients: Tools for machine learning and deep learning.

Food chemistry
Ultrasound-assisted novel solvent extraction enhances plant bioactive compound yield via cavitation, mechanical, and thermal mechanisms. However, the high designability of novel solvents, the multiple influence factors for extracting results, the com...

A critical review on occurrence, speciation, mobilization, and toxicity of per- and polyfluoroalkyl substances in the soil-microbe-plant system and bioremediation strategies.

Journal of hazardous materials
Per- and polyfluoroalkyl substances (PFAS) are a group of recalcitrant anthropogenic compounds that are extensively utilized for numerous industrial applications globally. Despite such vast utilization, PFAS accumulation in the soils and sediments wi...

Comparing machine learning isoscapes of Sr/Sr ratios of plants on the island of Sardinia: Implications for the use of isoscapes for assessing the provenance of biological specimens.

The Science of the total environment
Strontium isotope analysis is widely used to evaluate the provenance and mobility of biological specimens. Frequently applied in archaeology, palaeontology, ecology, forensics, and food science, strontium isotope analysis compares the Sr/Sr ratio of ...

A hybrid predictor-corrector network and spatiotemporal classifier method for noisy plant PET image classification.

Physics in medicine and biology
. Plant Positron Emission Tomography (PET) is a new and efficient imaging technique which aims at providing a quantitative analysis of plant stress, enabling personalized crop management and maximizing productivity. However, a highly performant class...

Fermi calculations enable quick downselection of target genes and process optimization in photosynthetic systems.

Plant physiology
Understanding how photosynthetic organisms including plants and microbes respond to their environment is crucial for optimizing agricultural practices and ensuring food and energy security, particularly in the context of climactic change and sustaina...

Letter to the Editor regarding "Prediction of PFAS bioaccumulation in different plant tissues with machine learning models based on molecular fingerprints" by Song et al. (2024), Sci. Total Environ. 950 175091.

The Science of the total environment
Song et al. (2024), "Prediction of PFAS bioaccumulation in different plant tissues with machine learning models based on molecular fingerprints," employed machine learning methods, such as XGBoost and SHapley Additive exPlanations (SHAP), to predict ...

Next generation technologies for protein structure determination: challenges and breakthroughs in plant biology applications.

Journal of plant physiology
Advancements in structural biology have significantly deepened our understanding of plant proteins, which are central to critical biological functions such as photosynthesis, metabolism, signal transduction, and structural architechture. Gaining insi...

Efficient estimation of plant species diversity in desert regions using UAV-based quadrats and advanced machine learning techniques.

Journal of environmental management
Understanding the distribution of plant species diversity(PSD) along spatial and environmental gradients is essential for implementing effective conservation strategies. However, effective monitoring of large-scale PSD in desert regions remain challe...