AIMC Topic:
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An ontology for major histocompatibility restriction.
Journal of biomedical semantics
Jan 11, 2016
BACKGROUND: MHC molecules are a highly diverse family of proteins that play a key role in cellular immune recognition. Over time, different techniques and terminologies have been developed to identify the specific type(s) of MHC molecule involved in ...
CD-Based Indices for Link Prediction in Complex Network.
PloS one
Jan 11, 2016
Lots of similarity-based algorithms have been designed to deal with the problem of link prediction in the past decade. In order to improve prediction accuracy, a novel cosine similarity index CD based on distance between nodes and cosine value betwee...
Spark, an application based on Serendipitous Knowledge Discovery.
Journal of biomedical informatics
Dec 28, 2015
Findings from information-seeking behavior research can inform application development. In this report we provide a system description of Spark, an application based on findings from Serendipitous Knowledge Discovery studies and data structures known...
Running With an Elastic Lower Limb Exoskeleton.
Journal of applied biomechanics
Dec 22, 2015
Although there have been many lower limb robotic exoskeletons that have been tested for human walking, few devices have been tested for assisting running. It is possible that a pseudo-passive elastic exoskeleton could benefit human running without th...
OntoStudyEdit: a new approach for ontology-based representation and management of metadata in clinical and epidemiological research.
Journal of biomedical semantics
Dec 18, 2015
BACKGROUND: The specification of metadata in clinical and epidemiological study projects absorbs significant expense. The validity and quality of the collected data depend heavily on the precise and semantical correct representation of their metadata...
Quantifying co-cultured cell phenotypes in high-throughput using pixel-based classification.
Methods (San Diego, Calif.)
Dec 11, 2015
Biologists increasingly use co-culture systems in which two or more cell types are grown in cell culture together in order to better model cells' native microenvironments. Co-cultures are often required for cell survival or proliferation, or to maint...
Extending gene ontology with gene association networks.
Bioinformatics (Oxford, England)
Dec 7, 2015
MOTIVATION: Gene ontology (GO) is a widely used resource to describe the attributes for gene products. However, automatic GO maintenance remains to be difficult because of the complex logical reasoning and the need of biological knowledge that are no...
Semi-Supervised Multi-View Learning for Gene Network Reconstruction.
PloS one
Dec 7, 2015
The task of gene regulatory network reconstruction from high-throughput data is receiving increasing attention in recent years. As a consequence, many inference methods for solving this task have been proposed in the literature. It has been recently ...
LedPred: an R/bioconductor package to predict regulatory sequences using support vector machines.
Bioinformatics (Oxford, England)
Dec 1, 2015
UNLABELLED: Supervised classification based on support vector machines (SVMs) has successfully been used for the prediction of cis-regulatory modules (CRMs). However, no integrated tool using such heterogeneous data as position-specific scoring matri...
Artificial Neural Networks-Based Software for Measuring Heat Collection Rate and Heat Loss Coefficient of Water-in-Glass Evacuated Tube Solar Water Heaters.
PloS one
Dec 1, 2015
Measurements of heat collection rate and heat loss coefficient are crucial for the evaluation of in service water-in-glass evacuated tube solar water heaters. However, conventional measurement requires expensive detection devices and undergoes a seri...
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