AI Medical Compendium Topic

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Biostatistics

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A non-parametric effect-size measure capturing changes in central tendency and data distribution shape.

PloS one
MOTIVATION: Calculating the magnitude of treatment effects or of differences between two groups is a common task in quantitative science. Standard effect size measures based on differences, such as the commonly used Cohen's, fail to capture the treat...

Combining deep learning with token selection for patient phenotyping from electronic health records.

Scientific reports
Artificial intelligence provides the opportunity to reveal important information buried in large amounts of complex data. Electronic health records (eHRs) are a source of such big data that provide a multitude of health related clinical information a...

At the intersection of machine learning, biology, and health: an interview with Lorin Crawford.

Communications biology
Lorin Crawford began his independent career at Brown University School of Public Health with his own lab in the summer of 2017. He is currently a Senior Researcher at Microsoft Research, New England while also keeping his faculty position at Brown Un...

Universal probabilistic programming offers a powerful approach to statistical phylogenetics.

Communications biology
Statistical phylogenetic analysis currently relies on complex, dedicated software packages, making it difficult for evolutionary biologists to explore new models and inference strategies. Recent years have seen more generic solutions based on probabi...

An initial game-theoretic assessment of enhanced tissue preparation and imaging protocols for improved deep learning inference of spatial transcriptomics from tissue morphology.

Briefings in bioinformatics
The application of deep learning to spatial transcriptomics (ST) can reveal relationships between gene expression and tissue architecture. Prior work has demonstrated that inferring gene expression from tissue histomorphology can discern these spatia...

Large Language Models can Help with Biostatistics and Coding Needed in Radiology Research.

Academic radiology
INTRODUCTION: Original research in radiology often involves handling large datasets, data manipulation, statistical tests, and coding. Recent studies show that large language models (LLMs) can solve bioinformatics tasks, suggesting their potential in...

BAMBI integrates biostatistical and artificial intelligence methods to improve RNA biomarker discovery.

Briefings in bioinformatics
RNA biomarkers enable early and precise disease diagnosis, monitoring, and prognosis, facilitating personalized medicine and targeted therapeutic strategies. However, identification of RNA biomarkers is hindered by the challenge of analyzing relative...