AIMC Topic: Adenosine Triphosphate

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ATPbind: Accurate Protein-ATP Binding Site Prediction by Combining Sequence-Profiling and Structure-Based Comparisons.

Journal of chemical information and modeling Feb 8, 2018
Protein-ATP interactions are ubiquitous in a wide variety of biological processes. Correctly locating ATP binding sites from protein information is an important but challenging task for protein function annotation and drug discovery. However, there i...
Protein Structure, Secondary Solvents Binding Sites Support Vector Machine Databases, Protein Adenosine Triphosphate Proteins
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HEPNet: A Knowledge Base Model of Human Energy Pool Network for Predicting the Energy Availability Status of an Individual.

PloS one Jun 8, 2015
HEPNet is an electronic representation of metabolic reactions occurring within human cellular organization focusing on inflow and outflow of the energy currency ATP, GTP and other energy associated moieties. The backbone of HEPNet consists of primary...
Humans Knowledge Bases Phosphocreatine Adenosine Triphosphate Carnitine Glucose Semantics Energy Metabolism Ketoglutaric Acids Models, Biological Uremia NAD Computer Simulation Acyl Coenzyme A Reproducibility of Results
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RTK_RAG: Leveraging Retrieval Augmented Generation with Multi-Window Convolutional Neural Networks for Superior ATP Binding Site Prediction in Receptor Tyrosine Kinases.

Journal of chemical information and modeling Jul 14, 2025
Receptor tyrosine kinases (RTKs) are key regulators of cellular signaling and are frequently involved in cancer development. As their activation depends on ATP binding to the kinase domain, precisely identifying ATP binding sites is critical for mech...
Neural Networks, Computer Convolutional Neural Networks Adenosine Triphosphate Binding Sites Receptor Protein-Tyrosine Kinases Humans
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Spiking Neural Membrane Systems with Adaptive Synaptic Time Delay.

International journal of neural systems Jun 1, 2024
Spiking neural membrane systems (or spiking neural P systems, SNP systems) are a new type of computation model which have attracted the attention of plentiful scholars for parallelism, time encoding, interpretability and extensibility. The original S...
Synapses Synaptic Transmission Neurons Adenosine Triphosphate Humans Neural Networks, Computer Time Factors Action Potentials Models, Neurological Astrocytes
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Real-Time Monitoring for Aseptic Drilling: Lessons Learned from the Atacama Rover Astrobiology Drilling Studies Contamination Control Strategy and Implementation and Application to the Icebreaker Mars Life Detection Mission.

Astrobiology Dec 1, 2023
In 2019, the Atacama Rover Astrobiology Drilling Studies (ARADS) project field-tested an autonomous rover-mounted robotic drill prototype for a 6-Sol life detection mission to Mars (Icebreaker). ARADS drilled Mars-like materials in the Atacama Desert...
Cyanobacteria Robotics Adenosine Triphosphate Humans Biomarkers Exobiology Extraterrestrial Environment Mars
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Adenosine Triphosphate Protects from Elevated Extracellular Calcium-Induced Damage in Human Proximal Kidney Cells: Using Deep Learning to Predict Cytotoxicity.

Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology Sep 21, 2022
BACKGROUND/AIMS: In kidney, extracellular [Ca] can modulate intracellular [Ca] to control key cellular processes. Hence, extracellular [Ca] is normally maintained within narrow range. We tested effect of extracellular ATP on viability of human proxim...
Calmodulin Myeloid Cell Leukemia Sequence 1 Protein Adenosine Triphosphate Calcium Chloride Artificial Intelligence Deep Learning Kidney Calcium RNA, Messenger Humans
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Predictive Value of Immune Cell Functional Assay for Non-Cytomegalovirus Infection in Lung Transplant Recipients: A Multicenter Prospective Observational Study.

Archivos de bronconeumologia Nov 1, 2021
INTRODUCTION: Immune cell functional assay (ImmuKnow®) is a non-invasive method that measures the state of cellular immunity in immunosuppressed patients. We studied the prognostic value of the assay for predicting non-cytomegalovirus (CMV) infection...
Lung Transplantation Immunocompromised Host Humans Transplant Recipients Lung Adenosine Triphosphate
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[Effects of ATP on expression of inflammatory factors in endothelial progenitor cells induced by LPS and the mechanisms].

Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences Dec 28, 2018
To investigate the effects of adenosine triphosphate (ATP) on expression of inflammatory factors induced by lipopolysaccharide (LPS) in endothelial progenitor cells (EPCs), and to elucidate the possible mechanisms.
 Methods: Mononuclear cells were is...
NF-kappa B Adenosine Triphosphate Signal Transduction Leukocytes, Mononuclear Lipopolysaccharides Myeloid Differentiation Factor 88 Endothelial Progenitor Cells Humans Gene Expression Regulation Toll-Like Receptor 4 Lipopolysaccharide Receptors
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