AIMC Topic: Computational Biology

Clear Filters Showing 4521 to 4530 of 4583 articles

DeepChrome: deep-learning for predicting gene expression from histone modifications.

Bioinformatics (Oxford, England)
MOTIVATION: Histone modifications are among the most important factors that control gene regulation. Computational methods that predict gene expression from histone modification signals are highly desirable for understanding their combinatorial effec...

Learning approaches to improve prediction of drug sensitivity in breast cancer patients.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Predicting drug response to cancer disease is an important problem in modern clinical oncology that attracted increasing recent attention from various domains such as computational biology, machine learning, and data mining. Cancer patients respond d...

Structural classification of protein sequences based on signal processing and support vector machines.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
The function of any protein depends directly on its secondary and tertiary structure. Proteins can fold into a three-dimensional shape, which is primarily depended on the arrangement of amino acids in the primary structure. In recent years, with the ...

Biomarker discovery based on BBHA and AdaboostM1 on microarray data for cancer classification.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
In this paper, a new approach based on Binary Black Hole Algorithm (BBHA) and Adaptive Boosting version Ml (AdaboostM1) is proposed for finding genes that can classify the group of cancers correctly. In this approach, BBHA is used to perform gene sel...

FMLNCSIM: fuzzy measure-based lncRNA functional similarity calculation model.

Oncotarget
Accumulating experimental studies have indicated the influence of lncRNAs on various critical biological processes as well as disease development and progression. Calculating lncRNA functional similarity is of high value in inferring lncRNA functions...

MSLVP: prediction of multiple subcellular localization of viral proteins using a support vector machine.

Molecular bioSystems
Knowledge of the subcellular location (SCL) of viral proteins in the host cell is important for understanding their function in depth. Therefore, we have developed "MSLVP", a two-tier prediction algorithm for predicting multiple SCLs of viral protein...

Using the Gene Ontology to Annotate Key Players in Parkinson's Disease.

Neuroinformatics
The Gene Ontology (GO) is widely recognised as the gold standard bioinformatics resource for summarizing functional knowledge of gene products in a consistent and computable, information-rich language. GO describes cellular and organismal processes a...

What time is it? Deep learning approaches for circadian rhythms.

Bioinformatics (Oxford, England)
MOTIVATION: Circadian rhythms date back to the origins of life, are found in virtually every species and every cell, and play fundamental roles in functions ranging from metabolism to cognition. Modern high-throughput technologies allow the measureme...

Fast metabolite identification with Input Output Kernel Regression.

Bioinformatics (Oxford, England)
MOTIVATION: An important problematic of metabolomics is to identify metabolites using tandem mass spectrometry data. Machine learning methods have been proposed recently to solve this problem by predicting molecular fingerprint vectors and matching t...