AIMC Topic: Deep Learning

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Deep-learning augmented RNA-seq analysis of transcript splicing.

Nature methods
A major limitation of RNA sequencing (RNA-seq) analysis of alternative splicing is its reliance on high sequencing coverage. We report DARTS (https://github.com/Xinglab/DARTS), a computational framework that integrates deep-learning-based predictions...

Artificial intelligence in cytopathology: a review of the literature and overview of commercial landscape.

Journal of the American Society of Cytopathology
Artificial intelligence (AI) has made impressive strides recently in interpreting complex images, thanks to improvements in deep learning techniques and increasing computational power. Researchers have started applying these advanced techniques to pa...

Robust segmentation of arterial walls in intravascular ultrasound images using Dual Path U-Net.

Ultrasonics
A Fully Convolutional Network (FCN) based deep architecture called Dual Path U-Net (DPU-Net) is proposed for automatic segmentation of the lumen and media-adventitia in IntraVascular UltraSound (IVUS) frames, which is crucial for diagnosis of many ca...

3D whole brain segmentation using spatially localized atlas network tiles.

NeuroImage
Detailed whole brain segmentation is an essential quantitative technique in medical image analysis, which provides a non-invasive way of measuring brain regions from a clinical acquired structural magnetic resonance imaging (MRI). Recently, deep conv...

Evolution of Deep Convolutional Neural Networks Using Cartesian Genetic Programming.

Evolutionary computation
The convolutional neural network (CNN), one of the deep learning models, has demonstrated outstanding performance in a variety of computer vision tasks. However, as the network architectures become deeper and more complex, designing CNN architectures...

Learning Where to See: A Novel Attention Model for Automated Immunohistochemical Scoring.

IEEE transactions on medical imaging
Estimating over-amplification of human epidermal growth factor receptor 2 (HER2) on invasive breast cancer is regarded as a significant predictive and prognostic marker. We propose a novel deep reinforcement learning (DRL)-based model that treats imm...

IVS2vec: A tool of Inverse Virtual Screening based on word2vec and deep learning techniques.

Methods (San Diego, Calif.)
Inverse Virtual Screening is a powerful technique in the early stage of drug discovery process. This technique can provide important clues for biologically active molecules, which is useful in the following researches of durg discovery. In this work,...

Fast and fully-automated detection and segmentation of pulmonary nodules in thoracic CT scans using deep convolutional neural networks.

Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
Deep learning techniques have been extensively used in computerized pulmonary nodule analysis in recent years. Many reported studies still utilized hybrid methods for diagnosis, in which convolutional neural networks (CNNs) are used only as one part ...

BIRNet: Brain image registration using dual-supervised fully convolutional networks.

Medical image analysis
In this paper, we propose a deep learning approach for image registration by predicting deformation from image appearance. Since obtaining ground-truth deformation fields for training can be challenging, we design a fully convolutional network that i...

Baseball Player Behavior Classification System Using Long Short-Term Memory with Multimodal Features.

Sensors (Basel, Switzerland)
In this paper, a preliminary baseball player behavior classification system is proposed. By using multiple IoT sensors and cameras, the proposed method accurately recognizes many of baseball players' behaviors by analyzing signals from heterogeneous ...