AIMC Topic: Deep Learning

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CDeep3M-Plug-and-Play cloud-based deep learning for image segmentation.

Nature methods
As biomedical imaging datasets expand, deep neural networks are considered vital for image processing, yet community access is still limited by setting up complex computational environments and availability of high-performance computing resources. We...

Feature Representation and Data Augmentation for Human Activity Classification Based on Wearable IMU Sensor Data Using a Deep LSTM Neural Network.

Sensors (Basel, Switzerland)
Wearable inertial measurement unit (IMU) sensors are powerful enablers for acquisition of motion data. Specifically, in human activity recognition (HAR), IMU sensor data collected from human motion are categorically combined to formulate datasets tha...

Dixon-VIBE Deep Learning (DIVIDE) Pseudo-CT Synthesis for Pelvis PET/MR Attenuation Correction.

Journal of nuclear medicine : official publication, Society of Nuclear Medicine
Whole-body attenuation correction (AC) is still challenging in combined PET/MR scanners. We describe Dixon-VIBE Deep Learning (DIVIDE), a deep-learning network that allows synthesizing pelvis pseudo-CT maps based only on the standard Dixon volumetric...

Segmenting the Brain Surface From CT Images With Artifacts Using Locally Oriented Appearance and Dictionary Learning.

IEEE transactions on medical imaging
The accurate segmentation of the brain surface in post-surgical computed tomography (CT) images is critical for image-guided neurosurgical procedures in epilepsy patients. Following surgical implantation of intracranial electrodes, surgeons require a...

Deep learning for supervised classification of spatial epidemics.

Spatial and spatio-temporal epidemiology
In an emerging epidemic, public health officials must move quickly to contain the spread. Information obtained from statistical disease transmission models often informs the development of containment strategies. Inference procedures such as Bayesian...

Improved Peptide Retention Time Prediction in Liquid Chromatography through Deep Learning.

Analytical chemistry
The accuracy of peptide retention time (RT) prediction model in liquid chromatography (LC) is still not sufficient for wider implementation in proteomics practice. Herein, we propose deep learning as an ideal tool to considerably improve this predict...

Fréchet ChemNet Distance: A Metric for Generative Models for Molecules in Drug Discovery.

Journal of chemical information and modeling
The new wave of successful generative models in machine learning has increased the interest in deep learning driven de novo drug design. However, method comparison is difficult because of various flaws of the currently employed evaluation metrics. We...

Quantitative structure-activity relationship analysis using deep learning based on a novel molecular image input technique.

Bioorganic & medicinal chemistry letters
Quantitative structure-activity relationship (QSAR) analysis uses structural, quantum chemical, and physicochemical features calculated from molecular geometry as explanatory variables predicting physiological activity. Recently, deep learning based ...

Automated retinopathy of prematurity screening using deep neural networks.

EBioMedicine
BACKGROUND: Retinopathy of prematurity (ROP) is the leading cause of childhood blindness worldwide. Automated ROP detection system is urgent and it appears to be a safe, reliable, and cost-effective complement to human experts.