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Knowledge Bases

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About Our Knowledge Base: How Knowledge Development Informs Researchers and Readers.

Journal of human lactation : official journal of International Lactation Consultant Association

A knowledge-based approach to automated planning for hepatocellular carcinoma.

Journal of applied clinical medical physics
PURPOSE: To build a knowledge-based model of liver cancer for Auto-Planning, a function in Pinnacle, which is used as an automated inverse intensity modulated radiation therapy (IMRT) planning system.

The Liver Toxicity Knowledge Base (LKTB) and drug-induced liver injury (DILI) classification for assessment of human liver injury.

Expert review of gastroenterology & hepatology
Drug-induced liver injury (DILI) is challenging for drug development, clinical practice and regulation. The Liver Toxicity Knowledge Base (LTKB) provides essential data for DILI study. Areas covered: The LTKB provided various types of data that can b...

Evaluation of an automated knowledge-based textual summarization system for longitudinal clinical data, in the intensive care domain.

Artificial intelligence in medicine
OBJECTIVES: To examine the feasibility of the automated creation of meaningful free-text summaries of longitudinal clinical records, using a new general methodology that we had recently developed; and to assess the potential benefits to the clinical ...

Distant Supervision with Transductive Learning for Adverse Drug Reaction Identification from Electronic Medical Records.

Journal of healthcare engineering
Information extraction and knowledge discovery regarding adverse drug reaction (ADR) from large-scale clinical texts are very useful and needy processes. Two major difficulties of this task are the lack of domain experts for labeling examples and int...

An automatic approach for constructing a knowledge base of symptoms in Chinese.

Journal of biomedical semantics
BACKGROUND: While a large number of well-known knowledge bases (KBs) in life science have been published as Linked Open Data, there are few KBs in Chinese. However, KBs in Chinese are necessary when we want to automatically process and analyze electr...

A novel method to identify pre-microRNA in various species knowledge base on various species.

Journal of biomedical semantics
BACKGROUND: More than 1/3 of human genes are regulated by microRNAs. The identification of microRNA (miRNA) is the precondition of discovering the regulatory mechanism of miRNA and developing the cure for genetic diseases. The traditional identificat...

Convex-PL: a novel knowledge-based potential for protein-ligand interactions deduced from structural databases using convex optimization.

Journal of computer-aided molecular design
We present a novel optimization approach to train a free-shape distance-dependent protein-ligand scoring function called Convex-PL. We do not impose any functional form of the scoring function. Instead, we decompose it into a polynomial basis and ded...

Knowledge Representation and Management, It's Time to Integrate!

Yearbook of medical informatics
To select, present, and summarize the best papers published in 2016 in the field of Knowledge Representation and Management (KRM). A comprehensive and standardized review of the medical informatics literature was performed based on a PubMed query. ...