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Natural Language Processing

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Investigation of bias in the automated assessment of school violence.

Journal of biomedical informatics
OBJECTIVES: Natural language processing and machine learning have the potential to lead to biased predictions. We designed a novel Automated RIsk Assessment (ARIA) machine learning algorithm that assesses risk of violence and aggression in adolescent...

Supporting the working life exposome: Annotating occupational exposure for enhanced literature search.

PloS one
An individual's likelihood of developing non-communicable diseases is often influenced by the types, intensities and duration of exposures at work. Job exposure matrices provide exposure estimates associated with different occupations. However, due t...

Practical Evaluation of ChatGPT Performance for Radiology Report Generation.

Academic radiology
RATIONALE AND OBJECTIVES: The process of generating radiology reports is often time-consuming and labor-intensive, prone to incompleteness, heterogeneity, and errors. By employing natural language processing (NLP)-based techniques, this study explore...

FLAT: Fusing layer representations for more efficient transfer learning in NLP.

Neural networks : the official journal of the International Neural Network Society
Parameter efficient transfer learning (PETL) methods provide an efficient alternative for fine-tuning. However, typical PETL methods inject the same structures to all Pre-trained Language Model (PLM) layers and only use the final hidden states for do...

Exploring mechanobiology network of bone and dental tissue based on Natural Language Processing.

Journal of biomechanics
Bone and cartilage tissues are physiologically dynamic organs that are systematically regulated by mechanical inputs. At cellular level, mechanical stimulation engages an intricate network where mechano-sensors and transmitters cooperate to manipulat...

Mapping vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models.

Journal of biomedical semantics
BACKGROUND: Vaccines have revolutionized public health by providing protection against infectious diseases. They stimulate the immune system and generate memory cells to defend against targeted diseases. Clinical trials evaluate vaccine performance, ...

Role of Natural Language Processing in Automatic Detection of Unexpected Findings in Radiology Reports: A Comparative Study of RoBERTa, CNN, and ChatGPT.

Academic radiology
RATIONALE AND OBJECTIVES: Large Language Models can capture the context of radiological reports, offering high accuracy in detecting unexpected findings. We aim to fine-tune a Robustly Optimized BERT Pretraining Approach (RoBERTa) model for the autom...

[Automatic ICD-10 coding : Natural language processing for German MRI reports].

Radiologie (Heidelberg, Germany)
BACKGROUND: The medical coding of radiology reports is essential for a good quality of care and correct billing, but at the same time a complex and error-prone task.

Language models for biological research: a primer.

Nature methods
Language models are playing an increasingly important role in many areas of artificial intelligence (AI) and computational biology. In this primer, we discuss the ways in which language models, both those based on natural language and those based on ...

Global Research on Pandemics or Epidemics and Mental Health: A Natural Language Processing Study.

Journal of epidemiology and global health
BACKGROUND: The global research on pandemics or epidemics and mental health has been growing exponentially recently, which cannot be integrated through traditional systematic review. Our study aims to systematically synthesize the evidence using natu...