AIMC Topic: Neural Networks, Computer

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Convolutional neural network model to predict causal risk factors that share complex regulatory features.

Nucleic acids research
Major progress in disease genetics has been made through genome-wide association studies (GWASs). One of the key tasks for post-GWAS analyses is to identify causal noncoding variants with regulatory function. Here, on the basis of >2000 functional fe...

DNN-Dom: predicting protein domain boundary from sequence alone by deep neural network.

Bioinformatics (Oxford, England)
MOTIVATION: Accurate delineation of protein domain boundary plays an important role for protein engineering and structure prediction. Although machine-learning methods are widely used to predict domain boundary, these approaches often ignore long-ran...

ReSimNet: drug response similarity prediction using Siamese neural networks.

Bioinformatics (Oxford, England)
MOTIVATION: Traditional drug discovery approaches identify a target for a disease and find a compound that binds to the target. In this approach, structures of compounds are considered as the most important features because it is assumed that similar...

Deep neural network-assisted computed tomography diagnosis of metastatic lymph nodes from gastric cancer.

Chinese medical journal
BACKGROUND: Artificial intelligence-assisted image recognition technology is currently able to detect the target area of an image and fetch information to make classifications according to target features. This study aimed to use deep neural networks...

Establishment and application of an artificial intelligence diagnosis system for pancreatic cancer with a faster region-based convolutional neural network.

Chinese medical journal
BACKGROUND: Early diagnosis and accurate staging are important to improve the cure rate and prognosis for pancreatic cancer. This study was performed to develop an automatic and accurate imaging processing technique system, allowing this system to re...

[Material properties and tensile strength prediction model of traditional Chinese medicine tablets based on PCA-RBF neural network].

Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica
This paper constructs a prediction model of material attribute-tensile strength based on principal component analysis-radial basis neural network( PCA-RBF),in order to predict the formability of traditional Chinese medicine tablets. Firstly,design Ex...

PVsiRNAPred: Prediction of plant exclusive virus-derived small interfering RNAs by deep convolutional neural network.

Journal of bioinformatics and computational biology
Plant exclusive virus-derived small interfering RNAs (vsiRNAs) regulate various biological processes, especially important in antiviral immunity. The identification of plant vsiRNAs is important for understanding the biogenesis and function mechanism...

Convolutional neural network for single-sensor acoustic localization of a transiting broadband source in very shallow water.

The Journal of the Acoustical Society of America
When a broadband source of radiated noise transits past a fixed hydrophone, a Lloyd's mirror constructive/destructive interference pattern can be observed in the output spectrogram. By taking the spectrum of a (log) spectrum, the power cepstrum detec...

Bayesian framework for simulation of dynamical systems from multidimensional data using recurrent neural network.

Chaos (Woodbury, N.Y.)
We suggest a new method for building data-driven dynamical models from observed multidimensional time series. The method is based on a recurrent neural network with specific structure, which allows for the joint reconstruction of both a low-dimension...

Network physiology in insomnia patients: Assessment of relevant changes in network topology with interpretable machine learning models.

Chaos (Woodbury, N.Y.)
Network physiology describes the human body as a complex network of interacting organ systems. It has been applied successfully to determine topological changes in different sleep stages. However, the number of network links can quickly grow above th...