AIMC Topic: Soil Microbiology

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Artificial Intelligence-Assisted Automatic Raman-Activated Cell Sorting (AI-RACS) System for Mining Specific Functional Microorganisms in the Microbiome.

Analytical chemistry
The microbiome represents the natural presence of microorganisms, and exploring, understanding, and leveraging its functions will bring about significant breakthroughs in life sciences and applications. Raman-activated cell sorting (RACS) enables the...

Machine learning models reveal how polycyclic aromatic hydrocarbons influence environmental bacterial communities.

The Science of the total environment
Polycyclic aromatic hydrocarbons (PAHs) are harmful and widespread pollutants in the environment, posing an ecological threat. However, exploring the influence of PAHs on environmental bacterial communities in different habitats (soil, water, and sed...

Untargeted Metabolomics and Soil Community Metagenomics Analyses Combined with Machine Learning Evaluation Uncover Geographic Differences in Ginseng from Different Locations.

Journal of agricultural and food chemistry
C.A. Meyer, known as the "King of Herbs," has been used as a nutritional supplement for both food and medicine with the functions of relieving fatigue and improving immunity for thousands of years in China. In agricultural planting, soil environment...

Ensemble learning algorithms to elucidate the core microbiome's impact on carbon content and degradation properties at the soil aggregate level.

The Science of the total environment
Soil aggregates are crucial for soil organic carbon (OC) accumulation. This study, utilizing a 32-year fertilization experiment, investigates whether the core microbiome can elucidate variations in carbon content and decomposition across different ag...

Assessing the risk of E. coli contamination from manure application in Chinese farmland by integrating machine learning and Phydrus.

Environmental pollution (Barking, Essex : 1987)
This study aims to present a comprehensive study on the risks associated with the residual presence and transport of Escherichia coli (E. coli) in soil following the application of livestock manure in Chinese farmlands by integrating machine learning...

Nonionic surfactant Tween 80-facilitated bacterial transport in porous media: A nonmonotonic concentration-dependent performance, mechanism, and machine learning prediction.

Environmental research
The surfactant-enhanced bioremediation (SEBR) of organic-contaminated soil is a promising soil remediation technology, in which surfactants not only mobilize pollutants, but also alter the mobility of bacteria. However, the bacterial response and und...

Combining natural language processing and metabarcoding to reveal pathogen-environment associations.

PLoS neglected tropical diseases
Cryptococcus neoformans is responsible for life-threatening infections that primarily affect immunocompromised individuals and has an estimated worldwide burden of 220,000 new cases each year-with 180,000 resulting deaths-mostly in sub-Saharan Africa...

Artificial intelligence models to predict acute phytotoxicity in petroleum contaminated soils.

Ecotoxicology and environmental safety
Environment pollutants, especially those from total petroleum hydrocarbons (TPH), have a highly complex chemical, biological and physical impact on soils. Here we study this influence via modelling the TPH acute phytotoxicity effects on eleven sample...

Effects of corn straw on dissipation of polycyclic aromatic hydrocarbons and potential application of backpropagation artificial neural network prediction model for PAHs bioremediation.

Ecotoxicology and environmental safety
In order to provide a viable option for remediation of PAHs-contaminated soils, a greenhouse experiment was conducted to assess the effect of corn straw amendment (1%, 2%, 4% or 6%, w/w) on dissipation of aged polycyclic aromatic hydrocarbons (PAHs) ...