Journal of computational biology : a journal of computational molecular cell biology
Jan 5, 2022
Non-negative matrix factorization (NMF) is a fundamental matrix decomposition technique that is used primarily for dimensionality reduction and is increasing in popularity in the biological domain. Although finding a unique NMF is generally not possi...
Characterization of protein complexes, i.e. sets of proteins assembling into a single larger physical entity, is important, as such assemblies play many essential roles in cells such as gene regulation. From networks of protein-protein interactions, ...
Invasive rodent populations pose a threat to biodiversity across the globe. When confronted with these invaders, native species that evolved independently are often defenseless. CRISPR gene drive systems could provide a solution to this problem by sp...
Convolution neural network (CNN)-based fault diagnosis methods have been widely adopted to obtain representative features and used to classify fault modes due to their prominent feature extraction capability. However, a large number of labeled sample...
Humans continuously categorise inputs, but only rarely receive explicit feedback as to whether or not they are correct. This implies that they may be integrating unsupervised information together with their sparse supervised data - a form of semi-sup...
Human activity recognition without equipment plays a vital role in smart home applications, freeing humans from the shackles of wearable devices. In this paper, by using the channel state information (CSI) of the WiFi signal, semi-supervised transfer...
Currently, many methods that could estimate the effects of conditions on a given biological target require either strong modelling assumptions or separate screens. Traditionally, many conditions and targets, without doing all possible experiments, co...
Among an assortment of genetic variations, Missense are major ones which a small subset of them may led to the upset of the protein function and ultimately end in human diseases. Various machine learning methods were declared to differentiate deleter...
Vision loss happens due to diabetic retinopathy (DR) in severe stages. Thus, an automatic detection method applied to diagnose DR in an earlier phase may help medical doctors to make better decisions. DR is considered one of the main risks, leading t...
IEEE/ACM transactions on computational biology and bioinformatics
Dec 8, 2021
This interdisciplinary work focuses on the interest of a new auto-encoder for supervised classification of live cell populations growing in a thermostated imaging station and acquired by a Quantitative Phase Imaging (QPI) camera. This type of camera ...