AIMC Topic: Support Vector Machine

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iMethyl-STTNC: Identification of N-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences.

Journal of theoretical biology
N- methyladenosine (mA) is a vital post-transcriptional modification, which adds another layer of epigenetic regulation at RNA level. It chemically modifies mRNA that effects protein expression. RNA sequence contains many genetic code motifs (GAC). A...

Training sparse least squares support vector machines by the QR decomposition.

Neural networks : the official journal of the International Neural Network Society
The solution of an LS-SVM has suffered from the problem of non-sparseness. The paper proposed to apply the KMP algorithm, with the number of support vectors as the regularization parameter, to tackle the non-sparseness problem of LS-SVMs. The idea of...

Multilevel Feature Representation of FDG-PET Brain Images for Diagnosing Alzheimer's Disease.

IEEE journal of biomedical and health informatics
Using a single imaging modality to diagnose Alzheimer's disease (AD) or mild cognitive impairment (MCI) is a challenging task. FluoroDeoxyGlucose Positron Emission Tomography (FDG-PET) is an important and effective modality used for that purpose. In ...

Neuro-cognitive mechanisms of global Gestalt perception in visual quantification.

NeuroImage
Recent neuroimaging studies identified posterior regions in the temporal and parietal lobes as neuro-functional correlates of subitizing and global Gestalt perception. Beyond notable overlap on a neuronal level both mechanisms are remarkably similar ...

Transferability of artificial neural networks for clinical document classification across hospitals: A case study on abnormality detection from radiology reports.

Journal of biomedical informatics
OBJECTIVE: Application of machine learning techniques for automatic and reliable classification of clinical documents have shown promising results. However, machine learning models require abundant training data specific to each target hospital and m...

Classification of ADHD with bi-objective optimization.

Journal of biomedical informatics
Attention Deficit Hyperactive Disorder (ADHD) is one of the most common diseases in school aged children. In this paper, we consider using fMRI data with classification techniques to aid the diagnosis of ADHD and propose a bi-objective ADHD classific...

Organization of Neural Population Code in Mouse Visual System.

eNeuro
The mammalian visual system consists of several anatomically distinct areas, layers, and cell types. To understand the role of these subpopulations in visual information processing, we analyzed neural signals recorded from excitatory neurons from var...

Drug Repositioning for Schizophrenia and Depression/Anxiety Disorders: A Machine Learning Approach Leveraging Expression Data.

IEEE journal of biomedical and health informatics
Development of new medications is a lengthy and costly process, and drug repositioning might help to shorten the development cycle. We present a machine learning (ML) workflow to drug discovery or repositioning by predicting indication for a particul...

Classification of thyroid hormone receptor agonists and antagonists using statistical learning approaches.

Molecular diversity
In silico models are presented for modeling and predicting thyroid hormone receptor (TR) agonists and antagonists. A data set consisting of 258 compounds is used in the present work. The C4.5, random forest (RF) and support vector machine (SVM) stati...

RFAmyloid: A Web Server for Predicting Amyloid Proteins.

International journal of molecular sciences
Amyloid is an insoluble fibrous protein and its mis-aggregation can lead to some diseases, such as Alzheimer's disease and Creutzfeldt⁻Jakob's disease. Therefore, the identification of amyloid is essential for the discovery and understanding of disea...