AIMC Topic: Terminology as Topic

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Building integrated ontological knowledge structures with efficient approximation algorithms.

BioMed research international Oct 13, 2015
The integration of ontologies builds knowledge structures which brings new understanding on existing terminologies and their associations. With the steady increase in the number of ontologies, automatic integration of ontologies is preferable over ma...
Pattern Recognition, Automated Terminology as Topic Systems Integration Database Management Systems Machine Learning Algorithms Databases, Factual Natural Language Processing Information Storage and Retrieval Biological Ontologies
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Comparison of UMLS terminologies to identify risk of heart disease using clinical notes.

Journal of biomedical informatics Sep 12, 2015
The second track of the 2014 i2b2 challenge asked participants to automatically identify risk factors for heart disease among diabetic patients using natural language processing techniques for clinical notes. This paper describes a rule-based system ...
Coronary Artery Disease Confidentiality Data Mining Longitudinal Studies Narration Natural Language Processing Computer Security Vocabulary, Controlled Male Diabetes Complications Middle Aged Ohio Risk Assessment Pattern Recognition, Automated Comorbidity Terminology as Topic Electronic Health Records Humans Incidence Unified Medical Language System Female Cohort Studies Aged
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MELLO: Medical lifelog ontology for data terms from self-tracking and lifelog devices.

International journal of medical informatics Aug 17, 2015
OBJECTIVE: The increasing use of health self-tracking devices is making the integration of heterogeneous data and shared decision-making more challenging. Computational analysis of lifelog data has been hampered by the lack of semantic and syntactic ...
Self Care Information Storage and Retrieval Biological Ontologies Electronic Health Records Republic of Korea Terminology as Topic Medical Records
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Normalizing clinical terms using learned edit distance patterns.

Journal of the American Medical Informatics Association : JAMIA Jul 31, 2015
BACKGROUND: Variations of clinical terms are very commonly encountered in clinical texts. Normalization methods that use similarity measures or hand-coded approximation rules for matching clinical terms to standard terminologies have limited accuracy...
Natural Language Processing Terminology as Topic Unified Medical Language System Vocabulary, Controlled Machine Learning Algorithms
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Perspectives on next steps in classification of oro-facial pain - part 1: role of ontology.

Journal of oral rehabilitation Jul 25, 2015
The purpose of this study was to review existing principles of oro-facial pain classifications and to specify design recommendations for a new system that would reflect recent insights in biomedical classification systems, terminologies and ontologie...
Biological Ontologies Terminology as Topic Congresses as Topic Temporomandibular Joint Disorders Facial Pain Pain Measurement Dental Research Humans Consensus
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A tuberculosis ontology for host systems biology.

Tuberculosis (Edinburgh, Scotland) Jun 30, 2015
A major hurdle facing tuberculosis (TB) investigators who want to utilize a rapidly growing body of data from both systems biology approaches and omics technologies is the lack of a standard vocabulary for data annotation and reporting. Lacking a mea...
Humans Animals Gene Expression Profiling Gene Expression Regulation Host-Pathogen Interactions Terminology as Topic Gene Ontology Genetic Markers Transcriptome Systems Biology Databases, Genetic Tuberculosis Mycobacterium tuberculosis
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The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease.

American journal of human genetics Jun 25, 2015
The Human Phenotype Ontology (HPO) is widely used in the rare disease community for differential diagnostics, phenotype-driven analysis of next-generation sequence-variation data, and translational research, but a comparable resource has not been ava...
Genetic Diseases, Inborn MEDLINE Terminology as Topic Gene Ontology Phenotype Humans Models, Biological
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Interactive Cohort Identification of Sleep Disorder Patients Using Natural Language Processing and i2b2.

Applied clinical informatics May 27, 2015
UNLABELLED: Nationwide Children's Hospital established an i2b2 (Informatics for Integrating Biology & the Bedside) application for sleep disorder cohort identification. Discrete data were gleaned from semistructured sleep study reports. The system sh...
Medical Informatics Biological Ontologies Humans Terminology as Topic Cohort Studies User-Computer Interface Natural Language Processing Data Mining
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A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC.

Journal of the American Medical Informatics Association : JAMIA May 6, 2015
OBJECTIVE: To create a multilingual gold-standard corpus for biomedical concept recognition.
Terminology as Topic Unified Medical Language System Multilingualism Natural Language Processing Information Storage and Retrieval Semantics
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Self-training in significance space of support vectors for imbalanced biomedical event data.

BMC bioinformatics Apr 23, 2015
BACKGROUND: Pairwise relationships extracted from biomedical literature are insufficient in formulating biomolecular interactions. Extraction of complex relations (namely, biomedical events) has become the main focus of the text-mining community. How...
Information Storage and Retrieval Natural Language Processing Terminology as Topic Periodicals as Topic Databases, Bibliographic Humans Data Mining Algorithms Models, Theoretical
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