AIMC Topic: Algorithms

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Inhibition activity prediction for a dataset of candidates' drug by combining fuzzy logic with MLR/ANN QSAR models.

Chemical biology & drug design
A hybrid of artificial intelligence simple and low computational cost QSAR was used. Approximately 90 pyridinylimidazole-based drug candidates with a range of potencies against p38R MAP kinase were investigated. To obtain more flexibility and effecti...

Convolutional neural network approach to lung cancer classification integrating protein interaction network and gene expression profiles.

Journal of bioinformatics and computational biology
Deep learning technologies are permeating every field from image and speech recognition to computational and systems biology. However, the application of convolutional neural networks (CCNs) to "omics" data poses some difficulties, such as the proces...

Social Trait Information in Deep Convolutional Neural Networks Trained for Face Identification.

Cognitive science
Faces provide information about a person's identity, as well as their sex, age, and ethnicity. People also infer social and personality traits from the face - judgments that can have important societal and personal consequences. In recent years, deep...

Predicting response to cancer immunotherapy using noninvasive radiomic biomarkers.

Annals of oncology : official journal of the European Society for Medical Oncology
INTRODUCTION: Immunotherapy is regarded as one of the major breakthroughs in cancer treatment. Despite its success, only a subset of patients responds-urging the quest for predictive biomarkers. We hypothesize that artificial intelligence (AI) algori...

A Machine-Learning Algorithm to Optimise Automated Adverse Drug Reaction Detection from Clinical Coding.

Drug safety
INTRODUCTION: Adverse drug reaction (ADR) detection in hospitals is heavily reliant on spontaneous reporting by clinical staff, with studies in the literature pointing to high rates of underreporting [1]. International Classification of Diseases, 10t...

DeepT3: deep convolutional neural networks accurately identify Gram-negative bacterial type III secreted effectors using the N-terminal sequence.

Bioinformatics (Oxford, England)
MOTIVATION: Various bacterial pathogens can deliver their secreted substrates also called effectors through Type III secretion systems (T3SSs) into host cells and cause diseases. Since T3SS secreted effectors (T3SEs) play important roles in pathogen-...

Bastion3: a two-layer ensemble predictor of type III secreted effectors.

Bioinformatics (Oxford, England)
MOTIVATION: Type III secreted effectors (T3SEs) can be injected into host cell cytoplasm via type III secretion systems (T3SSs) to modulate interactions between Gram-negative bacterial pathogens and their hosts. Due to their relevance in pathogen-hos...