AIMC Topic: Deep Learning

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LncADeep: an ab initio lncRNA identification and functional annotation tool based on deep learning.

Bioinformatics (Oxford, England)
MOTIVATION: To characterize long non-coding RNAs (lncRNAs), both identifying and functionally annotating them are essential to be addressed. Moreover, a comprehensive construction for lncRNA annotation is desired to facilitate the research in the fie...

LncRNAnet: long non-coding RNA identification using deep learning.

Bioinformatics (Oxford, England)
MOTIVATION: Long non-coding RNAs (lncRNAs) are important regulatory elements in biological processes. LncRNAs share similar sequence characteristics with messenger RNAs, but they play completely different roles, thus providing novel insights for biol...

PhotoAgeClock: deep learning algorithms for development of non-invasive visual biomarkers of aging.

Aging
Aging biomarkers are the qualitative and quantitative indicators of the aging processes of the human body. Estimation of biological age is important for assessing the physiological state of an organism. The advent of machine learning lead to the deve...

Automatic speech recognition: A primer for speech-language pathology researchers.

International journal of speech-language pathology
Automatic speech recognition (ASR) is increasingly becoming an integral component of our daily lives. This trend is in large part due to recent advances in machine learning, and specifically in deep learning, that have led to accurate ASR across nume...

Utility of deep neural networks in predicting gross-total resection after transsphenoidal surgery for pituitary adenoma: a pilot study.

Neurosurgical focus
OBJECTIVEGross-total resection (GTR) is often the primary surgical goal in transsphenoidal surgery for pituitary adenoma. Existing classifications are effective at predicting GTR but are often hampered by limited discriminatory ability in moderate ca...

Deep learning to predict microscope images.

Nature methods
A species of neural network first described in 2015 can be trained to translate between images of the same field of view acquired by different modalities. Trained networks can use information inherent in grayscale images of cells to predict fluoresce...

Clinical Evaluation of a Multiparametric Deep Learning Model for Glioblastoma Segmentation Using Heterogeneous Magnetic Resonance Imaging Data From Clinical Routine.

Investigative radiology
OBJECTIVES: The aims of this study were, first, to evaluate a deep learning-based, automatic glioblastoma (GB) tumor segmentation algorithm on clinical routine data from multiple centers and compare the results to a ground truth, manual expert segmen...

A graph-embedded deep feedforward network for disease outcome classification and feature selection using gene expression data.

Bioinformatics (Oxford, England)
MOTIVATION: Gene expression data represents a unique challenge in predictive model building, because of the small number of samples (n) compared with the huge amount of features (p). This 'n≪p' property has hampered application of deep learning techn...