AIMC Topic: Disease Models, Animal

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Embryonic cranial cartilage defects in the Fgfr3 mouse model of achondroplasia.

Anatomical record (Hoboken, N.J. : 2007)
Achondroplasia, the most common chondrodysplasia in humans, is caused by one of two gain of function mutations localized in the transmembrane domain of fibroblast growth factor receptor 3 (FGFR3) leading to constitutive activation of FGFR3 and subseq...

Quantifying acute kidney injury in an Ischaemia-Reperfusion Injury mouse model using deep-learning-based semantic segmentation in histology.

Biology open
This study focuses on ischaemia-reperfusion injury (IRI) in kidneys, a cause of acute kidney injury (AKI) and end-stage kidney disease (ESKD). Traditional kidney damage assessment methods are semi-quantitative and subjective. This study aims to use a...

Combining electromyographic and electrical impedance data sets through machine learning: A study in D2-mdx and wild-type mice.

Muscle & nerve
INTRODUCTION/AIMS: Needle impedance-electromyography (iEMG) assesses the active and passive electrical properties of muscles concurrently by using a novel needle with six electrodes, two for EMG and four for electrical impedance myography (EIM). Here...

Deep Learning-Based Image Analysis of Liver Steatosis in Mouse Models.

The American journal of pathology
The incidence of nonalcoholic fatty liver disease is a continuously growing health problem worldwide, along with obesity. Therefore, novel methods to both efficiently study the manifestation of nonalcoholic fatty liver disease and to analyze drug eff...

A fully automated micro‑CT deep learning approach for precision preclinical investigation of lung fibrosis progression and response to therapy.

Respiratory research
Micro-computed tomography (µCT)-based imaging plays a key role in monitoring disease progression and response to candidate drugs in various animal models of human disease, but manual image processing is still highly time-consuming and prone to operat...

A pharmacokinetic-pharmacodynamic model based on the SSA-1DCNN-Attention network and the semicompartment method.

Biotechnology & genetic engineering reviews
To solve the problem of inaccurate prediction caused by the lack of representativeness of samples due to the small sample size of the collected clinical data when using machine learning methods to predict drug concentration in plasma and describe the...

Scratch-AID, a deep learning-based system for automatic detection of mouse scratching behavior with high accuracy.

eLife
Mice are the most commonly used model animals for itch research and for development of anti-itch drugs. Most laboratories manually quantify mouse scratching behavior to assess itch intensity. This process is labor-intensive and limits large-scale gen...

3-Dimensional Immunostaining and Automated Deep-Learning Based Analysis of Nerve Degeneration.

International journal of molecular sciences
Multiple sclerosis (MS) is an autoimmune and neurodegenerative disease driven by inflammation and demyelination in the brain, spinal cord, and optic nerve. Optic neuritis, characterized by inflammation and demyelination of the optic nerve, is a sympt...

A fully automated deep learning pipeline for micro-CT-imaging-based densitometry of lung fibrosis murine models.

Respiratory research
Idiopathic pulmonary fibrosis, the archetype of pulmonary fibrosis (PF), is a chronic lung disease of a poor prognosis, characterized by progressively worsening of lung function. Although histology is still the gold standard for PF assessment in prec...

Deep learning-based behavioral profiling of rodent stroke recovery.

BMC biology
BACKGROUND: Stroke research heavily relies on rodent behavior when assessing underlying disease mechanisms and treatment efficacy. Although functional motor recovery is considered the primary targeted outcome, tests in rodents are still poorly reprod...