AIMC Topic: Disease Resistance

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Machine learning approaches reveal genomic regions associated with sugarcane brown rust resistance.

Scientific reports Nov 18, 2020
Sugarcane is an economically important crop, but its genomic complexity has hindered advances in molecular approaches for genetic breeding. New cultivars are released based on the identification of interesting traits, and for sugarcane, brown rust re...
Genomics Genotype Saccharum Machine Learning Phenotype Genes, Plant Chromosome Mapping Disease Resistance Genome, Plant Quantitative Trait Loci Plant Diseases Basidiomycota
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Resistance gene identification from Larimichthys crocea with machine learning techniques.

Scientific reports Dec 6, 2016
The research on resistance genes (R-gene) plays a vital role in bioinformatics as it has the capability of coping with adverse changes in the external environment, which can form the corresponding resistance protein by transcription and translation. ...
Disease Resistance Histocompatibility Antigens Cation Transport Proteins Interferons Genome Antimicrobial Cationic Peptides Perciformes Immunoglobulins Datasets as Topic Animals Gene Expression Regulation Machine Learning Immunity, Innate Fish Proteins Fish Diseases
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DRPPP: A machine learning based tool for prediction of disease resistance proteins in plants.

Computers in biology and medicine Sep 13, 2016
Plant disease outbreak is increasing rapidly around the globe and is a major cause for crop loss worldwide. Plants, in turn, have developed diverse defense mechanisms to identify and evade different pathogenic microorganisms. Early identification of ...
Computational Biology Support Vector Machine Models, Statistical Plants Plant Proteins Disease Resistance
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Harnessing the fish gut microbiome and immune system to enhance disease resistance in aquaculture.

Fish & shellfish immunology Aug 1, 2025
The increasing global reliance on aquaculture is challenged by disease outbreaks, exacerbated by antibiotic resistance, and environmental stressors. Traditional strategies, such as antibiotic treatments and chemical interventions, are becoming less e...
Disease Resistance Probiotics Fishes Animals Prebiotics Diet Aquaculture Gastrointestinal Microbiome Fish Diseases
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Machine learning for phytopathology: from the molecular scale towards the network scale.

Briefings in bioinformatics Sep 2, 2021
With the increasing volume of high-throughput sequencing data from a variety of omics techniques in the field of plant-pathogen interactions, sorting, retrieving, processing and visualizing biological information have become a great challenge. Within...
Gene Expression Regulation Fungal Proteins Host-Pathogen Interactions NLR Proteins Plants Plant Diseases Pathogen-Associated Molecular Pattern Molecules Support Vector Machine Viral Proteins Plant Pathology Protein Serine-Threonine Kinases Protein Interaction Mapping Receptors, Pattern Recognition Disease Resistance Bayes Theorem Bacterial Proteins
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Applications of Machine Learning Methods to Genomic Selection in Breeding Wheat for Rust Resistance.

The plant genome Jul 1, 2018
New methods and algorithms are being developed for predicting untested phenotypes in schemes commonly used in genomic selection (GS). The prediction of disease resistance in GS has its own peculiarities: a) there is consensus about the additive natur...
Basidiomycota Disease Resistance Genome, Plant Plant Diseases Linear Models Plant Breeding Neural Networks, Computer Machine Learning Genomics Models, Genetic Support Vector Machine Triticum
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Distinct Transcriptional and Anti-Mycobacterial Profiles of Peripheral Blood Monocytes Dependent on the Ratio of Monocytes: Lymphocytes.

EBioMedicine Nov 1, 2015
The ratio of monocytes and lymphocytes (ML ratio) in peripheral blood is associated with tuberculosis and malaria disease risk and cancer and cardiovascular disease outcomes. We studied anti-mycobacterial function and the transcriptome of monocytes i...
Disease Susceptibility Binding Sites Leukocyte Count Tuberculosis Lymphocytes Interferons Humans Monocytes Young Adult Gene Expression Profiling Disease Resistance Female Transcriptome Signal Transduction Adult Mycobacterium Protein Binding Transcription Factors Male
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