AIMC Topic: Electronic Health Records

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A comparison of rule-based and machine learning approaches for classifying patient portal messages.

International journal of medical informatics
OBJECTIVE: Secure messaging through patient portals is an increasingly popular way that consumers interact with healthcare providers. The increasing burden of secure messaging can affect clinic staffing and workflows. Manual management of portal mess...

Natural Language Processing for Asthma Ascertainment in Different Practice Settings.

The journal of allergy and clinical immunology. In practice
BACKGROUND: We developed and validated NLP-PAC, a natural language processing (NLP) algorithm based on predetermined asthma criteria (PAC) for asthma ascertainment using electronic health records at Mayo Clinic.

Text Mining of the Electronic Health Record: An Information Extraction Approach for Automated Identification and Subphenotyping of HFpEF Patients for Clinical Trials.

Journal of cardiovascular translational research
Precision medicine requires clinical trials that are able to efficiently enroll subtypes of patients in whom targeted therapies can be tested. To reduce the large amount of time spent screening, identifying, and recruiting patients with specific subt...

Automated problem list generation and physicians perspective from a pilot study.

International journal of medical informatics
OBJECTIVE: An accurate, comprehensive and up-to-date problem list can help clinicians provide patient-centered care. Unfortunately, problem lists created and maintained in electronic health records by providers tend to be inaccurate, duplicative and ...

De-identification of clinical notes via recurrent neural network and conditional random field.

Journal of biomedical informatics
De-identification, identifying information from data, such as protected health information (PHI) present in clinical data, is a critical step to enable data to be shared or published. The 2016 Centers of Excellence in Genomic Science (CEGS) Neuropsyc...

The effects of natural language processing on cross-institutional portability of influenza case detection for disease surveillance.

Applied clinical informatics
OBJECTIVES: This study evaluates the accuracy and portability of a natural language processing (NLP) tool for extracting clinical findings of influenza from clinical notes across two large healthcare systems. Effectiveness is evaluated on how well NL...

Semi-supervised medical entity recognition: A study on Spanish and Swedish clinical corpora.

Journal of biomedical informatics
OBJECTIVE: The goal of this study is to investigate entity recognition within Electronic Health Records (EHRs) focusing on Spanish and Swedish. Of particular importance is a robust representation of the entities. In our case, we utilized unsupervised...

Deep Learning for Automated Extraction of Primary Sites From Cancer Pathology Reports.

IEEE journal of biomedical and health informatics
Pathology reports are a primary source of information for cancer registries which process high volumes of free-text reports annually. Information extraction and coding is a manual, labor-intensive process. In this study, we investigated deep learning...

Tool-supported Interactive Correction and Semantic Annotation of Narrative Clinical Reports.

Methods of information in medicine
OBJECTIVES: Our main objective is to design a method of, and supporting software for, interactive correction and semantic annotation of narrative clinical reports, which would allow for their easier and less erroneous processing outside their origina...