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Histology

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A dense multi-path decoder for tissue segmentation in histopathology images.

Computer methods and programs in biomedicine
BACKGROUND AND OBJECTIVE: Segmenting different tissue components in histopathological images is of great importance for analyzing tissues and tumor environments. In recent years, an encoder-decoder family of convolutional neural networks has increasi...

Impact of pre-analytical variables on deep learning accuracy in histopathology.

Histopathology
AIMS: Machine learning (ML) binary classification in diagnostic histopathology is an area of intense investigation. Several assumptions, including training image quality/format and the number of training images required, appear to be similar in many ...

Identifying transcriptomic correlates of histology using deep learning.

PloS one
Linking phenotypes to specific gene expression profiles is an extremely important problem in biology, which has been approached mainly by correlation methods or, more fundamentally, by studying the effects of gene perturbations. However, genome-wide ...

From Scope to Screen: The Evolution of Histology Education.

Advances in experimental medicine and biology
Histology, the branch of anatomy also known as microscopic anatomy, is the study of the structure and function of the body's tissues. To gain an understanding of the tissues of the body is to learn the foundational underpinnings of anatomy and achiev...

Resolution-based distillation for efficient histology image classification.

Artificial intelligence in medicine
Developing deep learning models to analyze histology images has been computationally challenging, as the massive size of the images causes excessive strain on all parts of the computing pipeline. This paper proposes a novel deep learning-based method...

Handcrafted Histological Transformer (H2T): Unsupervised representation of whole slide images.

Medical image analysis
Diagnostic, prognostic and therapeutic decision-making of cancer in pathology clinics can now be carried out based on analysis of multi-gigapixel tissue images, also known as whole-slide images (WSIs). Recently, deep convolutional neural networks (CN...

High-Order Correlation-Guided Slide-Level Histology Retrieval With Self-Supervised Hashing.

IEEE transactions on pattern analysis and machine intelligence
Histopathological Whole Slide Images (WSIs) play a crucial role in cancer diagnosis. It is of significant importance for pathologists to search for images sharing similar content with the query WSI, especially in the case-based diagnosis. While slide...

Validating instructional design and predicting student performance in histology education: Using machine learning via virtual microscopy.

Anatomical sciences education
As a part of modern technological environments, virtual microscopy enriches histological learning, with support from large institutional investments. However, existing literature does not supply empirical evidence of its role in improving pedagogy. V...

Comparing the performance of artificial intelligence learning models to medical students in solving histology and embryology multiple choice questions.

Annals of anatomy = Anatomischer Anzeiger : official organ of the Anatomische Gesellschaft
INTRODUCTION: The appearance of artificial intelligence language models (AI LMs) in the form of chatbots has gained a lot of popularity worldwide, potentially interfering with different aspects of education, including medical education as well. The p...

Registered multi-device/staining histology image dataset for domain-agnostic machine learning models.

Scientific data
Variations in color and texture of histopathology images are caused by differences in staining conditions and imaging devices between hospitals. These biases decrease the robustness of machine learning models exposed to out-of-domain data. To address...