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DRMDA: deep representations-based miRNA-disease association prediction.

Journal of cellular and molecular medicine
Recently, microRNAs (miRNAs) are confirmed to be important molecules within many crucial biological processes and therefore related to various complex human diseases. However, previous methods of predicting miRNA-disease associations have their own d...

Getting RID of the blues: Formulating a Risk Index for Depression (RID) using structural equation modeling.

The Australian and New Zealand journal of psychiatry
OBJECTIVE: While risk factors for depression are increasingly known, there is no widely utilised depression risk index. Our objective was to develop a method for a flexible, modular, Risk Index for Depression using structural equation models of key d...

Identification and segmentation of myelinated nerve fibers in a cross-sectional optical microscopic image using a deep learning model.

Journal of neuroscience methods
BACKGROUND: The morphometric analysis of myelinated nerve fibers of peripheral nerves in cross-sectional optical microscopic images is valuable. Several automated methods for nerve fiber identification and segmentation have been reported. This paper ...

Fully automatic, multiorgan segmentation in normal whole body magnetic resonance imaging (MRI), using classification forests (CFs), convolutional neural networks (CNNs), and a multi-atlas (MA) approach.

Medical physics
PURPOSE: As part of a program to implement automatic lesion detection methods for whole body magnetic resonance imaging (MRI) in oncology, we have developed, evaluated, and compared three algorithms for fully automatic, multiorgan segmentation in hea...
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Deep learning of the sectional appearances of 3D CT images for anatomical structure segmentation based on an FCN voting method.

Medical physics
PURPOSE: We propose a single network trained by pixel-to-label deep learning to address the general issue of automatic multiple organ segmentation in three-dimensional (3D) computed tomography (CT) images. Our method can be described as a voxel-wise ...

Development and validation of a multivariate predictive model for rheumatoid arthritis mortality using a machine learning approach.

Scientific reports
We developed and independently validated a rheumatoid arthritis (RA) mortality prediction model using the machine learning method Random Survival Forests (RSF). Two independent cohorts from Madrid (Spain) were used: the Hospital ClĂ­nico San Carlos RA...

Identification of autism spectrum disorder using deep learning and the ABIDE dataset.

NeuroImage. Clinical
The goal of the present study was to apply deep learning algorithms to identify autism spectrum disorder (ASD) patients from large brain imaging dataset, based solely on the patients brain activation patterns. We investigated ASD patients brain imagi...
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Using Machine Learning to Define the Association between Cardiorespiratory Fitness and All-Cause Mortality (from the Henry Ford Exercise Testing Project).

The American journal of cardiology
Previous studies have demonstrated that cardiorespiratory fitness is a strong marker of cardiovascular health. Machine learning (ML) can enhance the prediction of outcomes through classification techniques that classify the data into predetermined ca...

Novel Method Proposing Chemical Structures with Desirable Profile of Activities Based on Chemical and Protein Spaces.

Molecular informatics
Active molecules among numerous chemical structures in a chemical database can be searched easily by statistical prediction of compound-protein interactions. However, constructing a simple prediction model against one protein does not aid drug design...