AIMC Topic: Machine Learning

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Machine learning differentiates enzymatic and non-enzymatic metals in proteins.

Nature communications
Metalloenzymes are 40% of all enzymes and can perform all seven classes of enzyme reactions. Because of the physicochemical similarities between the active sites of metalloenzymes and inactive metal binding sites, it is challenging to differentiate b...

Combining machine learning and nanopore construction creates an artificial intelligence nanopore for coronavirus detection.

Nature communications
High-throughput, high-accuracy detection of emerging viruses allows for the control of disease outbreaks. Currently, reverse transcription-polymerase chain reaction (RT-PCR) is currently the most-widely used technology to diagnose the presence of SAR...

A Pragmatic Machine Learning Model To Predict Carbapenem Resistance.

Antimicrobial agents and chemotherapy
Infection caused by carbapenem-resistant (CR) organisms is a rising problem in the United States. While the risk factors for antibiotic resistance are well known, there remains a large need for the early identification of antibiotic-resistant infecti...

Emerging machine learning approaches to phenotyping cellular motility and morphodynamics.

Physical biology
Cells respond heterogeneously to molecular and environmental perturbations. Phenotypic heterogeneity, wherein multiple phenotypes coexist in the same conditions, presents challenges when interpreting the observed heterogeneity. Advances in live cell ...

Stopping criteria for ending autonomous, single detector radiological source searches.

PloS one
While the localization of radiological sources has traditionally been handled with statistical algorithms, such a task can be augmented with advanced machine learning methodologies. The combination of deep and reinforcement learning has provided lear...

Effectiveness of resampling methods in coping with imbalanced crash data: Crash type analysis and predictive modeling.

Accident; analysis and prevention
Crash data analysis is commonly subjected to imbalanced data. Varied by facility and control types, some crash types are more frequent than others. However, uncommon crash types are routinely more severe and associated with higher economic and societ...

Application of machine learning to large in-vitro databases to identify cancer cell characteristics: telomerase reverse transcriptase (TERT) expression.

Oncogene
Advances in biotechnology and machine learning have created an enhanced environment for unearthing and exploiting previously unrecognized relationships between genomic and epigenetic data with potential therapeutic implications. We applied advanced a...

Objective pain stimulation intensity and pain sensation assessment using machine learning classification and regression based on electrodermal activity.

American journal of physiology. Regulatory, integrative and comparative physiology
An objective measure of pain remains an unmet need of people with chronic pain, estimated to be 1/3 of the adult population in the United States. The current gold standard to quantify pain is highly subjective, based upon self-reporting with numerica...

Machine learning models to select potential inhibitors of acetylcholinesterase activity from SistematX: a natural products database.

Molecular diversity
Alzheimer's disease is the most common form of dementia, representing 60-70% of dementia cases. The enzyme acetylcholinesterase (AChE) cleaves the ester bonds in acetylcholine and plays an important role in the termination of acetylcholine activity a...