AIMC Topic: Natural Language Processing

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eGARD: Extracting associations between genomic anomalies and drug responses from text.

PloS one
Tumor molecular profiling plays an integral role in identifying genomic anomalies which may help in personalizing cancer treatments, improving patient outcomes and minimizing risks associated with different therapies. However, critical information re...

Comparison Between Manual Auditing and a Natural Language Process With Machine Learning Algorithm to Evaluate Faculty Use of Standardized Reports in Radiology.

Journal of the American College of Radiology : JACR
PURPOSE: When implementing or monitoring department-sanctioned standardized radiology reports, feedback about individual faculty performance has been shown to be a useful driver of faculty compliance. Most commonly, these data are derived from manual...

Natural language processing: put your model where your mouth is.

Molecular systems biology
Molecular mechanisms are often described using “word models”—phrases intended to capture the interactions in a biological process. In their recent work, Sorger and colleagues (Gyori , 2017) provide a framework for converting word models into computat...

Vector representations of multi-word terms for semantic relatedness.

Journal of biomedical informatics
This paper presents a comparison between several multi-word term aggregation methods of distributional context vectors applied to the task of semantic similarity and relatedness in the biomedical domain. We compare the multi-word term aggregation met...

Behind the scenes: A medical natural language processing project.

International journal of medical informatics
Advancement of Artificial Intelligence (AI) capabilities in medicine can help address many pressing problems in healthcare. However, AI research endeavors in healthcare may not be clinically relevant, may have unrealistic expectations, or may not be ...

Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach.

BMC medical informatics and decision making
BACKGROUND: The medical subdomain of a clinical note, such as cardiology or neurology, is useful content-derived metadata for developing machine learning downstream applications. To classify the medical subdomain of a note accurately, we have constru...

Radiology report annotation using intelligent word embeddings: Applied to multi-institutional chest CT cohort.

Journal of biomedical informatics
We proposed an unsupervised hybrid method - Intelligent Word Embedding (IWE) that combines neural embedding method with a semantic dictionary mapping technique for creating a dense vector representation of unstructured radiology reports. We applied I...

Deep Learning to Classify Radiology Free-Text Reports.

Radiology
Purpose To evaluate the performance of a deep learning convolutional neural network (CNN) model compared with a traditional natural language processing (NLP) model in extracting pulmonary embolism (PE) findings from thoracic computed tomography (CT) ...

Artificial Intelligence in Medical Practice: The Question to the Answer?

The American journal of medicine
Computer science advances and ultra-fast computing speeds find artificial intelligence (AI) broadly benefitting modern society-forecasting weather, recognizing faces, detecting fraud, and deciphering genomics. AI's future role in medical practice rem...