AIMC Topic: Supervised Machine Learning

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The New Possibilities from "Big Data" to Overlooked Associations Between Diabetes, Biochemical Parameters, Glucose Control, and Osteoporosis.

Current osteoporosis reports
PURPOSE OF REVIEW: To review current practices and technologies within the scope of "Big Data" that can further our understanding of diabetes mellitus and osteoporosis from large volumes of data. "Big Data" techniques involving supervised machine lea...

Feasibility study of stain-free classification of cell apoptosis based on diffraction imaging flow cytometry and supervised machine learning techniques.

Apoptosis : an international journal on programmed cell death
This study was to explore the feasibility of prediction and classification of cells in different stages of apoptosis with a stain-free method based on diffraction images and supervised machine learning. Apoptosis was induced in human chronic myelogen...

Protein classification using modified n-grams and skip-grams.

Bioinformatics (Oxford, England)
MOTIVATION: Classification by supervised machine learning greatly facilitates the annotation of protein characteristics from their primary sequence. However, the feature generation step in this process requires detailed knowledge of attributes used t...

Predictive Modeling of Hamstring Strain Injuries in Elite Australian Footballers.

Medicine and science in sports and exercise
PURPOSE: Three of the most commonly identified hamstring strain injury (HSI) risk factors are age, previous HSI, and low levels of eccentric hamstring strength. However, no study has investigated the ability of these risk factors to predict the incid...

LitPathExplorer: a confidence-based visual text analytics tool for exploring literature-enriched pathway models.

Bioinformatics (Oxford, England)
MOTIVATION: Pathway models are valuable resources that help us understand the various mechanisms underpinning complex biological processes. Their curation is typically carried out through manual inspection of published scientific literature to find i...

Online Robust Projective Dictionary Learning: Shape Modeling for MR-TRUS Registration.

IEEE transactions on medical imaging
Robust and effective shape prior modeling from a set of training data remains a challenging task, since the shape variation is complicated, and shape models should preserve local details as well as handle shape noises. To address these challenges, a ...

Semi-supervised network inference using simulated gene expression dynamics.

Bioinformatics (Oxford, England)
MOTIVATION: Inferring the structure of gene regulatory networks from high-throughput datasets remains an important and unsolved problem. Current methods are hampered by problems such as noise, low sample size, and incomplete characterizations of regu...

Extreme learning machines for reverse engineering of gene regulatory networks from expression time series.

Bioinformatics (Oxford, England)
MOTIVATION: The reconstruction of gene regulatory networks (GRNs) from genes profiles has a growing interest in bioinformatics for understanding the complex regulatory mechanisms in cellular systems. GRNs explicitly represent the cause-effect of regu...

Deep learning for tumor classification in imaging mass spectrometry.

Bioinformatics (Oxford, England)
MOTIVATION: Tumor classification using imaging mass spectrometry (IMS) data has a high potential for future applications in pathology. Due to the complexity and size of the data, automated feature extraction and classification steps are required to f...

Orchid: a novel management, annotation and machine learning framework for analyzing cancer mutations.

Bioinformatics (Oxford, England)
MOTIVATION: As whole-genome tumor sequence and biological annotation datasets grow in size, number and content, there is an increasing basic science and clinical need for efficient and accurate data management and analysis software. With the emergenc...