AIMC Topic: Deep Learning

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Biomedical semantic indexing by deep neural network with multi-task learning.

BMC bioinformatics
BACKGROUND: Biomedical semantic indexing is important for information retrieval and many other research fields in bioinformatics. It annotates biomedical citations with Medical Subject Headings. In face of unbalanced category distribution in the trai...

Scalable deep text comprehension for Cancer surveillance on high-performance computing.

BMC bioinformatics
BACKGROUND: Deep Learning (DL) has advanced the state-of-the-art capabilities in bioinformatics applications which has resulted in trends of increasingly sophisticated and computationally demanding models trained by larger and larger data sets. This ...

Deep learning in the cross-time frequency domain for sleep staging from a single-lead electrocardiogram.

Physiological measurement
OBJECTIVE: This study classifies sleep stages from a single lead electrocardiogram (ECG) using beat detection, cardiorespiratory coupling in the time-frequency domain and a deep convolutional neural network (CNN).

Tumor co-segmentation in PET/CT using multi-modality fully convolutional neural network.

Physics in medicine and biology
Automatic tumor segmentation from medical images is an important step for computer-aided cancer diagnosis and treatment. Recently, deep learning has been successfully applied to this task, leading to state-of-the-art performance. However, most of exi...

Modelling the thermal behaviour of a building facade using deep learning.

PloS one
This article aims to model the thermal behaviour of a wall using deep learning techniques. The Fourier theoretical model which is traditionally used to model such enclosures is not capable of considering several factors that affect a prediction that ...

MILD-Net: Minimal information loss dilated network for gland instance segmentation in colon histology images.

Medical image analysis
The analysis of glandular morphology within colon histopathology images is an important step in determining the grade of colon cancer. Despite the importance of this task, manual segmentation is laborious, time-consuming and can suffer from subjectiv...

Fast animal pose estimation using deep neural networks.

Nature methods
The need for automated and efficient systems for tracking full animal pose has increased with the complexity of behavioral data and analyses. Here we introduce LEAP (LEAP estimates animal pose), a deep-learning-based method for predicting the positio...

Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry.

Nature methods
We present DeepNovo-DIA, a de novo peptide-sequencing method for data-independent acquisition (DIA) mass spectrometry data. We use neural networks to capture precursor and fragment ions across m/z, retention-time, and intensity dimensions. They are t...

Deep Learning-Based Detection of Intracranial Aneurysms in 3D TOF-MRA.

AJNR. American journal of neuroradiology
BACKGROUND AND PURPOSE: The rupture of an intracranial aneurysm is a serious incident, causing subarachnoid hemorrhage associated with high fatality and morbidity rates. Because the demand for radiologic examinations is steadily growing, physician fa...