AIMC Topic: Female

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Discovering predisposing genes for hereditary breast cancer using deep learning.

Briefings in bioinformatics
Breast cancer (BC) is the most common malignancy affecting Western women today. It is estimated that as many as 10% of BC cases can be attributed to germline variants. However, the genetic basis of the majority of familial BC cases has yet to be iden...

ctGAN: combined transformation of gene expression and survival data with generative adversarial network.

Briefings in bioinformatics
Recent studies have extensively used deep learning algorithms to analyze gene expression to predict disease diagnosis, treatment effectiveness, and survival outcomes. Survival analysis studies on diseases with high mortality rates, such as cancer, ar...

Advancing drug-response prediction using multi-modal and -omics machine learning integration (MOMLIN): a case study on breast cancer clinical data.

Briefings in bioinformatics
The inherent heterogeneity of cancer contributes to highly variable responses to any anticancer treatments. This underscores the need to first identify precise biomarkers through complex multi-omics datasets that are now available. Although much rese...

SPIN: sex-specific and pathway-based interpretable neural network for sexual dimorphism analysis.

Briefings in bioinformatics
Sexual dimorphism in prevalence, severity and genetic susceptibility exists for most common diseases. However, most genetic and clinical outcome studies are designed in sex-combined framework considering sex as a covariate. Few sex-specific studies h...

Unraveling Endometrial Cancer Survival Predictors Through Advanced Machine Learning Techniques.

Studies in health technology and informatics
This study explores endometrial cancer (EC) within the broader context of oncogynecology, focusing on 3,845 EC patients at the Almazov National Research Center. The research analyzes clinical data, employing machine learning techniques like random fo...

Use of Deep Learning to Evaluate Tumor Microenvironmental Features for Prediction of Colon Cancer Recurrence.

Cancer research communications
UNLABELLED: Deep learning may detect biologically important signals embedded in tumor morphologic features that confer distinct prognoses. Tumor morphologic features were quantified to enhance patient risk stratification within DNA mismatch repair (M...

Development and external validation of deep learning clinical prediction models using variable-length time series data.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVES: To compare and externally validate popular deep learning model architectures and data transformation methods for variable-length time series data in 3 clinical tasks (clinical deterioration, severe acute kidney injury [AKI], and suspected...

Preparing for the bedside-optimizing a postpartum depression risk prediction model for clinical implementation in a health system.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: We developed and externally validated a machine-learning model to predict postpartum depression (PPD) using data from electronic health records (EHRs). Effort is under way to implement the PPD prediction model within the EHR system for cli...

An interpretable predictive deep learning platform for pediatric metabolic diseases.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVES: Metabolic disease in children is increasing worldwide and predisposes a wide array of chronic comorbid conditions with severe impacts on quality of life. Tools for early detection are needed to promptly intervene to prevent or slow the de...

Generalizing Parkinson's disease detection using keystroke dynamics: a self-supervised approach.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Passive monitoring of touchscreen interactions generates keystroke dynamic signals that can be used to detect and track neurological conditions such as Parkinson's disease (PD) and psychomotor impairment with minimal burden on the user. Ho...