AIMC Topic: Gene Expression Profiling

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A diagnostic model for sepsis using an integrated machine learning framework approach and its therapeutic drug discovery.

BMC infectious diseases
BACKGROUND: Sepsis remains a life-threatening condition in intensive care units (ICU) with high morbidity and mortality rates. Some biomarkers commonly used in clinic do not have the characteristics of rapid and specific growth and rapid decline afte...

Combining machine learning with external validation to explore necroptosis and immune response in moyamoya disease.

BMC immunology
Moyamoya disease (MMD) is a rare chronic vascular disease leads to cognitive impairment and stroke with its etiology unknown. The relationship between necroptosis or necroinflammation and MMD pathogenesis was poorly understood. Differentially express...

Mitochondrial autophagy-related gene signatures associated with myasthenia gravis diagnosis and immunity.

Autoimmunity
Myasthenia gravis (MG) is a common autoimmune disorder that causes skeletal muscle weakness. Most patients presented with skeletal muscle weakness and endurance decline. Mitophagy refers to removing and interpreting aging or damaged mitochondria in c...

X-scPAE: An explainable deep learning model for embryonic lineage allocation prediction based on single-cell transcriptomics revealing key genes in embryonic cell development.

Computers in biology and medicine
In single-cell transcriptomics research, accurately predicting cell lineage allocation and identifying differences between lineages are crucial for understanding cell differentiation processes and reducing early pregnancy miscarriages in humans. This...

A machine learning-based investigation of integrin expression patterns in cancer and metastasis.

Scientific reports
Integrins, a family of transmembrane receptor proteins, are well known to play important roles in cancer development and metastasis. However, a comprehensive understanding of these roles has not been achieved due to the complex relationships between ...

A multi-classification deep neural network for cancer type identification from high-dimension, small-sample and imbalanced gene microarray data.

Scientific reports
Gene microarray technology provides an efficient way to diagnose cancer. However, microarray gene expression data face the challenges of high-dimension, small-sample, and multi-class imbalance. The coupling of these challenges leads to inaccurate res...

Machine Learning-Driven Identification of Molecular Subgroups in Medulloblastoma via Gene Expression Profiling.

Clinical oncology (Royal College of Radiologists (Great Britain))
AIMS: Medulloblastoma (MB) is the most prevalent malignant brain tumour in children, characterised by substantial molecular heterogeneity across its subgroups. Accurate classification is pivotal for personalised treatment strategies and prognostic as...

Identification of critical biomarkers and immune infiltration in preeclampsia through bioinformatics and machine learning methods.

BMC pregnancy and childbirth
BACKGROUND: Preeclampsia (PE) is a multisystem progressive disease that occurs during pregnancy. Previous studies have shown that the immune system is involved in the placental trophoblast function and the pathological process of uterine vascular rem...

Feature gene selection and functional validation of SH3KBP1 in infantile hemangioma using machine learning.

Biochemical and biophysical research communications
BACKGROUND: Infantile hemangioma (IH) is a prevalent vascular tumor in infancy with a complex pathogenesis that remains unclear. This study aimed to investigate the underlying mechanisms of IH using comprehensive bioinformatics analyses and in vitro ...