AIMC Topic: Internet

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Detecting tympanostomy tubes from otoscopic images via offline and online training.

Computers in biology and medicine
Tympanostomy tube placement has been commonly used nowadays as a surgical treatment for otitis media. Following the placement, regular scheduled follow-ups for checking the status of the tympanostomy tubes are important during the treatment. The comp...

Accurate in silico identification of protein succinylation sites using an iterative semi-supervised learning technique.

Journal of theoretical biology
As a widespread type of protein post-translational modifications (PTMs), succinylation plays an important role in regulating protein conformation, function and physicochemical properties. Compared with the labor-intensive and time-consuming experimen...

Screening Internet forum participants for depression symptoms by assembling and enhancing multiple NLP methods.

Computer methods and programs in biomedicine
Depression is a disease that can dramatically lower quality of life. Symptoms of depression can range from temporary sadness to suicide. Embarrassment, shyness, and the stigma of depression are some of the factors preventing people from getting help ...

MorphoCol: An ontology-based knowledgebase for the characterisation of clinically significant bacterial colony morphologies.

Journal of biomedical informatics
BACKGROUND: One of the major concerns of the biomedical community is the increasing prevalence of antimicrobial resistant microorganisms. Recent findings show that the diversification of colony morphology may be indicative of the expression of virule...

Understanding user intents in online health forums.

IEEE journal of biomedical and health informatics
Online health forums provide a convenient way for patients to obtain medical information and connect with physicians and peers outside of clinical settings. However, large quantities of unstructured and diversified content generated on these forums m...

Predicting long-term outcome of Internet-delivered cognitive behavior therapy for social anxiety disorder using fMRI and support vector machine learning.

Translational psychiatry
Cognitive behavior therapy (CBT) is an effective treatment for social anxiety disorder (SAD), but many patients do not respond sufficiently and a substantial proportion relapse after treatment has ended. Predicting an individual's long-term clinical ...

BiNChE: a web tool and library for chemical enrichment analysis based on the ChEBI ontology.

BMC bioinformatics
BACKGROUND: Ontology-based enrichment analysis aids in the interpretation and understanding of large-scale biological data. Ontologies are hierarchies of biologically relevant groupings. Using ontology annotations, which link ontology classes to biol...

Transformation of standardized clinical models based on OWL technologies: from CEM to OpenEHR archetypes.

Journal of the American Medical Informatics Association : JAMIA
INTRODUCTION: The semantic interoperability of electronic healthcare records (EHRs) systems is a major challenge in the medical informatics area. International initiatives pursue the use of semantically interoperable clinical models, and ontologies h...

Identifying DNA-binding proteins by combining support vector machine and PSSM distance transformation.

BMC systems biology
BACKGROUND: DNA-binding proteins play a pivotal role in various intra- and extra-cellular activities ranging from DNA replication to gene expression control. Identification of DNA-binding proteins is one of the major challenges in the field of genome...

Aber-OWL: a framework for ontology-based data access in biology.

BMC bioinformatics
BACKGROUND: Many ontologies have been developed in biology and these ontologies increasingly contain large volumes of formalized knowledge commonly expressed in the Web Ontology Language (OWL). Computational access to the knowledge contained within t...