AIMC Topic: Machine Learning

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Computerized "Learn-As-You-Go" classification of traumatic brain injuries using NEISS narrative data.

Accident; analysis and prevention
One important routine task in injury research is to effectively classify injury circumstances into user-defined categories when using narrative text. However, traditional manual processes can be time consuming, and existing batch learning systems can...

A Q-backpropagated time delay neural network for diagnosing severity of gait disturbances in Parkinson's disease.

Journal of biomedical informatics
Parkinson's disease (PD) is a movement disorder that affects the patient's nervous system and health-care applications mostly uses wearable sensors to collect these data. Since these sensors generate time stamped data, analyzing gait disturbances in ...

Toward rapid learning in cancer treatment selection: An analytical engine for practice-based clinical data.

Journal of biomedical informatics
OBJECTIVE: Wide-scale adoption of electronic medical records (EMRs) has created an unprecedented opportunity for the implementation of Rapid Learning Systems (RLSs) that leverage primary clinical data for real-time decision support. In cancer, where ...

Sparse Inverse Covariance Estimation with L0 Penalty for Network Construction with Omics Data.

Journal of computational biology : a journal of computational molecular cell biology
Constructing coexpression and association networks with omics data is crucial for studying gene-gene interactions and underlying biological mechanisms. In recent years, learning the structure of a Gaussian graphical model from high-dimensional data u...

Drug-Drug Interaction Extraction via Convolutional Neural Networks.

Computational and mathematical methods in medicine
Drug-drug interaction (DDI) extraction as a typical relation extraction task in natural language processing (NLP) has always attracted great attention. Most state-of-the-art DDI extraction systems are based on support vector machines (SVM) with a lar...

Statistical machine learning to identify traumatic brain injury (TBI) from structural disconnections of white matter networks.

NeuroImage
Identifying diffuse axonal injury (DAI) in patients with traumatic brain injury (TBI) presenting with normal appearing radiological MRI presents a significant challenge. Neuroimaging methods such as diffusion MRI and probabilistic tractography, which...

ChemTok: A New Rule Based Tokenizer for Chemical Named Entity Recognition.

BioMed research international
Named Entity Recognition (NER) from text constitutes the first step in many text mining applications. The most important preliminary step for NER systems using machine learning approaches is tokenization where raw text is segmented into tokens. This ...

TensorFlow: Biology's Gateway to Deep Learning?

Cell systems
TensorFlow is Google's recently released open-source software for deep learning. What are its applications for computational biology?

Machine Learning Capabilities of a Simulated Cerebellum.

IEEE transactions on neural networks and learning systems
This paper describes the learning and control capabilities of a biologically constrained bottom-up model of the mammalian cerebellum. Results are presented from six tasks: 1) eyelid conditioning; 2) pendulum balancing; 3) proportional-integral-deriva...

A CNN Regression Approach for Real-Time 2D/3D Registration.

IEEE transactions on medical imaging
In this paper, we present a Convolutional Neural Network (CNN) regression approach to address the two major limitations of existing intensity-based 2-D/3-D registration technology: 1) slow computation and 2) small capture range. Different from optimi...