AIMC Topic: Microscopy

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Edge Artificial Intelligence (AI) for real-time automatic quantification of filariasis in mobile microscopy.

PLoS neglected tropical diseases
Filariasis, a neglected tropical disease caused by roundworms, is a significant public health concern in many tropical countries. Microscopic examination of blood samples can detect and differentiate parasite species, but it is time consuming and req...

Code-Free Machine Learning Solutions for Microscopy Image Processing: Deep Learning.

Tissue engineering. Part A
In recent years, there has been a significant expansion in the realm of processing microscopy images, thanks to the advent of machine learning techniques. These techniques offer diverse applications for image processing. Currently, numerous methods a...

Perineuronal Net Microscopy: From Brain Pathology to Artificial Intelligence.

International journal of molecular sciences
Perineuronal nets (PNN) are a special highly structured type of extracellular matrix encapsulating synapses on large populations of CNS neurons. PNN undergo structural changes in schizophrenia, epilepsy, Alzheimer's disease, stroke, post-traumatic co...

Dilated Heterogeneous Convolution for Cell Detection and Segmentation Based on Mask R-CNN.

Sensors (Basel, Switzerland)
Owing to the variable shapes, large size difference, uneven grayscale, and dense distribution among biological cells in an image, it is very difficult to accurately detect and segment cells. Especially, it is a serious challenge for some microscope i...

DeepDOF-SE: affordable deep-learning microscopy platform for slide-free histology.

Nature communications
Histopathology plays a critical role in the diagnosis and surgical management of cancer. However, access to histopathology services, especially frozen section pathology during surgery, is limited in resource-constrained settings because preparing sli...

Context-aware deep learning enables high-efficacy localization of high concentration microbubbles for super-resolution ultrasound localization microscopy.

Nature communications
Ultrasound localization microscopy (ULM) enables deep tissue microvascular imaging by localizing and tracking intravenously injected microbubbles circulating in the bloodstream. However, conventional localization techniques require spatially isolated...

Advanced feature learning and classification of microscopic breast abnormalities using a robust deep transfer learning technique.

Microscopy research and technique
Breast cancer is a major health threat, with early detection crucial for improving cure and survival rates. Current systems rely on imaging technology, but digital pathology and computerized analysis can enhance accuracy, reduce false predictions, an...

Fine-tuning TrailMap: The utility of transfer learning to improve the performance of deep learning in axon segmentation of light-sheet microscopy images.

PloS one
Light-sheet microscopy has made possible the 3D imaging of both fixed and live biological tissue, with samples as large as the entire mouse brain. However, segmentation and quantification of that data remains a time-consuming manual undertaking. Mach...

The multimodality cell segmentation challenge: toward universal solutions.

Nature methods
Cell segmentation is a critical step for quantitative single-cell analysis in microscopy images. Existing cell segmentation methods are often tailored to specific modalities or require manual interventions to specify hyper-parameters in different exp...