AIMC Topic: Natural Language Processing

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Utility analysis and demonstration of real-world clinical texts: A case study on Japanese cancer-related EHRs.

PloS one
Real-world data (RWD) in the medical field, such as electronic health records (EHRs) and medication orders, are receiving increasing attention from researchers and practitioners. While structured data have played a vital role thus far, unstructured d...

BELT: Bootstrapped EEG-to-Language Training by Natural Language Supervision.

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society
Decoding natural language from noninvasive brain signals has been an exciting topic with the potential to expand the applications of brain-computer interface (BCI) systems. However, current methods face limitations in decoding sentences from electroe...

Extracting seizure control metrics from clinic notes of patients with epilepsy: A natural language processing approach.

Epilepsy research
OBJECTIVES: Monitoring seizure control metrics is key to clinical care of patients with epilepsy. Manually abstracting these metrics from unstructured text in electronic health records (EHR) is laborious. We aimed to abstract the date of last seizure...

Community knowledge graph abstraction for enhanced link prediction: A study on PubMed knowledge graph.

Journal of biomedical informatics
OBJECTIVE: As new knowledge is produced at a rapid pace in the biomedical field, existing biomedical Knowledge Graphs (KGs) cannot be manually updated in a timely manner. Previous work in Natural Language Processing (NLP) has leveraged link predictio...

Prompt Engineering Paradigms for Medical Applications: Scoping Review.

Journal of medical Internet research
BACKGROUND: Prompt engineering, focusing on crafting effective prompts to large language models (LLMs), has garnered attention for its capabilities at harnessing the potential of LLMs. This is even more crucial in the medical domain due to its specia...

The lived experience of gambling-related harm in natural language.

Psychology of addictive behaviors : journal of the Society of Psychologists in Addictive Behaviors
OBJECTIVE: Gambling-related harms can have a significant negative impact on disordered gamblers, lower risk gamblers, and affected others. Yet, most disordered and lower risk gamblers will never seek formal treatment, often due to the stigma and sham...

Bridging auditory perception and natural language processing with semantically informed deep neural networks.

Scientific reports
Sound recognition is effortless for humans but poses a significant challenge for artificial hearing systems. Deep neural networks (DNNs), especially convolutional neural networks (CNNs), have recently surpassed traditional machine learning in sound c...

EnzChemRED, a rich enzyme chemistry relation extraction dataset.

Scientific data
Expert curation is essential to capture knowledge of enzyme functions from the scientific literature in FAIR open knowledgebases but cannot keep pace with the rate of new discoveries and new publications. In this work we present EnzChemRED, for Enzym...

The Potential of Gemini and GPTs for Structured Report Generation based on Free-Text F-FDG PET/CT Breast Cancer Reports.

Academic radiology
RATIONALE AND OBJECTIVE: To compare the performance of large language model (LLM) based Gemini and Generative Pre-trained Transformers (GPTs) in data mining and generating structured reports based on free-text PET/CT reports for breast cancer after u...

Rule-based natural language processing to examine variation in worsening heart failure hospitalizations by age, sex, race and ethnicity, and left ventricular ejection fraction.

American heart journal
BACKGROUND: Prior studies characterizing worsening heart failure events (WHFE) have been limited in using structured healthcare data from hospitalizations, and with little exploration of sociodemographic variation. The current study examined the impa...