AIMC Topic: Phylogeny
Clear Filters Showing 131 to 140 of 212 articles
The development of loop-mediated isothermal amplification combined with lateral flow dipstick for detection of Karlodinium veneficum.
Harmful algae
Dec 21, 2016
The aim of this study was to develop a loop-mediated isothermal amplification (LAMP) combined with a chromatographic lateral flow dipstick (LFD) assay to rapidly and specifically detect the Karlodinium veneficum ITS gene. Four groups of LAMP primers ...
Identification of DEP domain-containing proteins by a machine learning method and experimental analysis of their expression in human HCC tissues.
Scientific reports
Dec 21, 2016
The Dishevelled/EGL-10/Pleckstrin (DEP) domain-containing (DEPDC) proteins have seven members. However, whether this superfamily can be distinguished from other proteins based only on the amino acid sequences, remains unknown. Here, we describe a com...
Carcinoma, Hepatocellular
Computational Biology
RNA, Messenger
Gene Expression Profiling
Real-Time Polymerase Chain Reaction
Liver Neoplasms
Protein Domains
Amino Acid Motifs
GTPase-Activating Proteins
Dishevelled Proteins
Gene Expression Regulation, Neoplastic
Signal Transduction
Cluster Analysis
Humans
Machine Learning
Algorithms
Phylogeny
Expansion of the Gene Ontology knowledgebase and resources.
Nucleic acids research
Nov 29, 2016
The Gene Ontology (GO) is a comprehensive resource of computable knowledge regarding the functions of genes and gene products. As such, it is extensively used by the biomedical research community for the analysis of -omics and related data. Our conti...
Integrated Automatic Workflow for Phylogenetic Tree Analysis Using Public Access and Local Web Services.
Journal of integrative bioinformatics
Nov 28, 2016
At the present, coding sequence (CDS) has been discovered and larger CDS is being revealed frequently. Approaches and related tools have also been developed and upgraded concurrently, especially for phylogenetic tree analysis. This paper proposes an ...
Support vector machine applied to predict the zoonotic potential of E. coli O157 cattle isolates.
Proceedings of the National Academy of Sciences of the United States of America
Sep 19, 2016
Sequence analyses of pathogen genomes facilitate the tracking of disease outbreaks and allow relationships between strains to be reconstructed and virulence factors to be identified. However, these methods are generally used after an outbreak has hap...
A new approach to the automatic identification of organism evolution using neural networks.
Bio Systems
Mar 11, 2016
Automatic identification of organism evolution still remains a challenging task, which is especially exiting, when the evolution of human is considered. The main aim of this work is to present a new idea to allow organism evolution analysis using neu...
Machine Learning Biogeographic Processes from Biotic Patterns: A New Trait-Dependent Dispersal and Diversification Model with Model Choice By Simulation-Trained Discriminant Analysis.
Systematic biology
Dec 28, 2015
Current statistical biogeographical analysis methods are limited in the ways ecology can be related to the processes of diversification and geographical range evolution, requiring conflation of geography and ecology, and/or assuming ecologies that ar...
Use of Dried Plasma Spots for HIV-1 Viral Load Determination and Drug Resistance Genotyping in Mexican Patients.
BioMed research international
Dec 8, 2015
Monitoring antiretroviral therapy using measurements of viral load (VL) and the genotyping of resistance mutations is not routinely performed in low- to middle-income countries because of the high costs of the commercial assays that are used. The ana...
DASACT: A decision aiding software for axiomatic consensus theory.
Mathematical biosciences
Nov 24, 2015
There have been various attempts, solutions, and approaches towards constructing an appropriate consensus tree based on a given set of phylogenetic trees. However, for practitioners, it is not always clear, for a given data set, which of these would ...
Codon bias and gene ontology in holometabolous and hemimetabolous insects.
Journal of experimental zoology. Part B, Molecular and developmental evolution
Oct 26, 2015
The relationship between preferred codon use (PCU), developmental mode, and gene ontology (GO) was investigated in a sample of nine insect species with sequenced genomes. These species were selected to represent two distinct modes of insect developme...
Don't Miss the Future of Medicine
Join thousands of healthcare professionals staying informed about the latest AI breakthroughs in medicine. Get curated insights delivered to your inbox.
Subscribe NowPopular Topics
- Machine Learning 31032
- Neural Networks, Computer 29717
- Algorithms 26831
- Deep Learning 26345
- Artificial Intelligence 24290
- Robotics 13311
- Image Processing, Computer-Assisted 9521
- Retrospective Studies 9110
- Magnetic Resonance Imaging 6181
- Reproducibility of Results 5592
- Tomography, X-Ray Computed 4770
- Support Vector Machine 4686
- Computational Biology 4236
- Brain 4050
- Computer Simulation 3881
Recent Journals
- Scientific reports 5940
- Sensors (Basel, Switzerland) 4794
- PloS one 4015
- Neural networks : the official journal of the International Neural Network Society 2929
- Computational intelligence and neuroscience 1931
- Computers in biology and medicine 1854
- Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference 1686
- Studies in health technology and informatics 1278
- IEEE journal of biomedical and health informatics 1130
- Journal of chemical information and modeling 998
- Nature communications 943
- Computer methods and programs in biomedicine 883
- Bioinformatics (Oxford, England) 861
- Briefings in bioinformatics 853
- IEEE transactions on neural networks and learning systems 826