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Multiscale High-Level Feature Fusion for Histopathological Image Classification.
Computational and mathematical methods in medicine
Dec 31, 2017
Histopathological image classification is one of the most important steps for disease diagnosis. We proposed a method for multiclass histopathological image classification based on deep convolutional neural network referred to as coding network. It c...
A convolutional autoencoder approach for mining features in cellular electron cryo-tomograms and weakly supervised coarse segmentation.
Journal of structural biology
Dec 28, 2017
Cellular electron cryo-tomography enables the 3D visualization of cellular organization in the near-native state and at submolecular resolution. However, the contents of cellular tomograms are often complex, making it difficult to automatically isola...
How Well Does Dual-energy CT with Fast Kilovoltage Switching Quantify CT Number and Iodine and Calcium Concentrations?
Academic radiology
Dec 21, 2017
RATIONALE AND OBJECTIVES: Because it is imperative for understanding the performance of dual-energy computed tomography scanner to determine clinical diagnosis, we aimed to assess the accuracy of quantitative measurements using dual-energy computed t...
Automatic hemolysis identification on aligned dual-lighting images of cultured blood agar plates.
Computer methods and programs in biomedicine
Dec 18, 2017
BACKGROUND AND OBJECTIVE: The recent introduction of Full Laboratory Automation systems in clinical microbiology opens to the availability of streams of high definition images representing bacteria culturing plates. This creates new opportunities to ...
Comparison Between Manual Auditing and a Natural Language Process With Machine Learning Algorithm to Evaluate Faculty Use of Standardized Reports in Radiology.
Journal of the American College of Radiology : JACR
Dec 18, 2017
PURPOSE: When implementing or monitoring department-sanctioned standardized radiology reports, feedback about individual faculty performance has been shown to be a useful driver of faculty compliance. Most commonly, these data are derived from manual...
Automated computer-based detection of encounter behaviours in groups of honeybees.
Scientific reports
Dec 15, 2017
Honeybees form societies in which thousands of members integrate their behaviours to act as a single functional unit. We have little knowledge on how the collaborative features are regulated by workers' activities because we lack methods that enable ...
FuzzyID2: A software package for large data set species identification via barcoding and metabarcoding using hidden Markov models and fuzzy set methods.
Molecular ecology resources
Dec 10, 2017
Species identification through DNA barcoding or metabarcoding has become a key approach for biodiversity evaluation and ecological studies. However, the rapid accumulation of barcoding data has created some difficulties: for instance, global enquirie...
Classification of cancer cells using computational analysis of dynamic morphology.
Computer methods and programs in biomedicine
Dec 7, 2017
BACKGROUND AND OBJECTIVE: Detection of metastatic tumor cells is important for early diagnosis and staging of cancer. However, such cells are exceedingly difficult to detect from blood or biopsy samples at the disease onset. It is reported that cance...
Utilizing knowledge base of amino acids structural neighborhoods to predict protein-protein interaction sites.
BMC bioinformatics
Dec 6, 2017
BACKGROUND: Protein-protein interactions (PPI) play a key role in an investigation of various biochemical processes, and their identification is thus of great importance. Although computational prediction of which amino acids take part in a PPI has b...
: High-Throughput Quantification of Fluorescent Synaptic Protein Puncta by Machine Learning.
eNeuro
Dec 6, 2017
Synapse formation analyses can be performed by imaging and quantifying fluorescent signals of synaptic markers. Traditionally, these analyses are done using simple or multiple thresholding and segmentation approaches or by labor-intensive manual anal...
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