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Pattern Classification of Instantaneous Cognitive Task-load Through GMM Clustering, Laplacian Eigenmap, and Ensemble SVMs.
IEEE/ACM transactions on computational biology and bioinformatics
May 3, 2016
The identification of the temporal variations in human operator cognitive task-load (CTL) is crucial for preventing possible accidents in human-machine collaborative systems. Recent literature has shown that the change of discrete CTL level during hu...
Chemical entity recognition in patents by combining dictionary-based and statistical approaches.
Database : the journal of biological databases and curation
May 2, 2016
We describe the development of a chemical entity recognition system and its application in the CHEMDNER-patent track of BioCreative 2015. This community challenge includes a Chemical Entity Mention in Patents (CEMP) recognition task and a Chemical Pa...
A hierarchical model for integrating unsupervised generative embedding and empirical Bayes.
Journal of neuroscience methods
Apr 30, 2016
BACKGROUND: Generative models of neuroimaging data, such as dynamic causal models (DCMs), are commonly used for inferring effective connectivity from individual subject data. Recently introduced "generative embedding" approaches have used DCM-based c...
APPAGATO: an APproximate PArallel and stochastic GrAph querying TOol for biological networks.
Bioinformatics (Oxford, England)
Apr 29, 2016
MOTIVATION: Biological network querying is a problem requiring a considerable computational effort to be solved. Given a target and a query network, it aims to find occurrences of the query in the target by considering topological and node similariti...
The Ontology for Biomedical Investigations.
PloS one
Apr 29, 2016
The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide...
Assistant Personal Robot (APR): Conception and Application of a Tele-Operated Assisted Living Robot.
Sensors (Basel, Switzerland)
Apr 28, 2016
This paper presents the technical description, mechanical design, electronic components, software implementation and possible applications of a tele-operated mobile robot designed as an assisted living tool. This robotic concept has been named Assist...
Computer-based coding of free-text job descriptions to efficiently identify occupations in epidemiological studies.
Occupational and environmental medicine
Apr 21, 2016
BACKGROUND: Mapping job titles to standardised occupation classification (SOC) codes is an important step in identifying occupational risk factors in epidemiological studies. Because manual coding is time-consuming and has moderate reliability, we de...
gkmSVM: an R package for gapped-kmer SVM.
Bioinformatics (Oxford, England)
Apr 19, 2016
UNLABELLED: We present a new R package for training gapped-kmer SVM classifiers for DNA and protein sequences. We describe an improved algorithm for kernel matrix calculation that speeds run time by about 2 to 5-fold over our original gkmSVM algorith...
DanQ: a hybrid convolutional and recurrent deep neural network for quantifying the function of DNA sequences.
Nucleic acids research
Apr 15, 2016
Modeling the properties and functions of DNA sequences is an important, but challenging task in the broad field of genomics. This task is particularly difficult for non-coding DNA, the vast majority of which is still poorly understood in terms of fun...
Initial investigation into computer scoring of candidate essays for personnel selection.
The Journal of applied psychology
Apr 14, 2016
[Correction Notice: An Erratum for this article was reported in Vol 101(7) of Journal of Applied Psychology (see record 2016-32115-001). In the article the affiliations for Emily D. Campion and Matthew H. Reider were originally incorrect. All version...
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