AIMC Topic:
Supervised Machine Learning

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Transfer Learning for Image Segmentation by Combining Image Weighting and Kernel Learning.

IEEE transactions on medical imaging
Many medical image segmentation methods are based on the supervised classification of voxels. Such methods generally perform well when provided with a training set that is representative of the test images to the segment. However, problems may arise ...

Supervised Segmentation of Un-Annotated Retinal Fundus Images by Synthesis.

IEEE transactions on medical imaging
We focus on the practical challenge of segmenting new retinal fundus images that are dissimilar to existing well-annotated data sets. It is addressed in this paper by a supervised learning pipeline, with its core being the construction of a synthetic...

A Supervised Ensemble Approach for Sensitive microRNA Target Prediction.

IEEE/ACM transactions on computational biology and bioinformatics
MicroRNAs, a class of small non-coding RNAs, regulate important biological functions via post-transcriptional regulation of messenger RNAs (mRNAs). Despite rapid development in miRNA research, precise experimental methods to determine miRNA target in...

Exploring the clinical features of narcolepsy type 1 versus narcolepsy type 2 from European Narcolepsy Network database with machine learning.

Scientific reports
Narcolepsy is a rare life-long disease that exists in two forms, narcolepsy type-1 (NT1) or type-2 (NT2), but only NT1 is accepted as clearly defined entity. Both types of narcolepsies belong to the group of central hypersomnias (CH), a spectrum of p...

Predicting Athlete Ground Reaction Forces and Moments From Spatio-Temporal Driven CNN Models.

IEEE transactions on bio-medical engineering
The accurate prediction of three-dimensional (3-D) ground reaction forces and moments (GRF/Ms) outside the laboratory setting would represent a watershed for on-field biomechanical analysis. To extricate the biomechanist's reliance on ground embedded...

Automatic Annotation for Human Activity Recognition in Free Living Using a Smartphone.

Sensors (Basel, Switzerland)
Data annotation is a time-consuming process posing major limitations to the development of Human Activity Recognition (HAR) systems. The availability of a large amount of labeled data is required for supervised Machine Learning (ML) approaches, espec...

A meta-learning framework using representation learning to predict drug-drug interaction.

Journal of biomedical informatics
MOTIVATION: Predicting Drug-Drug Interaction (DDI) has become a crucial step in the drug discovery and development process, owing to the rise in the number of drugs co-administered with other drugs. Consequently, the usage of computational methods fo...

Semi-supervised machine learning for automated species identification by collagen peptide mass fingerprinting.

BMC bioinformatics
BACKGROUND: Biomolecular methods for species identification are increasingly being utilised in the study of changing environments, both at the microscopic and macroscopic levels. High-throughput peptide mass fingerprinting has been largely applied to...

Weakly Supervised Biomedical Image Segmentation by Reiterative Learning.

IEEE journal of biomedical and health informatics
Recent advances in deep learning have produced encouraging results for biomedical image segmentation; however, outcomes rely heavily on comprehensive annotation. In this paper, we propose a neural network architecture and a new algorithm, known as ov...

Biological classification with RNA-seq data: Can alternatively spliced transcript expression enhance machine learning classifiers?

RNA (New York, N.Y.)
RNA sequencing (RNA-seq) is becoming a prevalent approach to quantify gene expression and is expected to gain better insights into a number of biological and biomedical questions compared to DNA microarrays. Most importantly, RNA-seq allows us to qua...