AIMC Topic: Animals

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Some Thoughts on Extended Collaboration of Entities with Natural and with Artificial Intelligence in Health Care and Beyond.

Studies in health technology and informatics
This lecture is dealing with new, future forms of collaboration and with its (hopefully existing) extended synergies, which may now will come in our era of digitization. Entities in this collaboration are we, the human beings, and other living entiti...

NetGO: improving large-scale protein function prediction with massive network information.

Nucleic acids research
Automated function prediction (AFP) of proteins is of great significance in biology. AFP can be regarded as a problem of the large-scale multi-label classification where a protein can be associated with multiple gene ontology terms as its labels. Bas...

Characterization of Helical Propulsion Inside In Vitro and Ex Vivo Models of a Rabbit Aorta.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
In this work, the propulsion of a helical robot is experimentally characterized inside whole blood (in vitro model) and against the flowing streams of phosphate buffered saline (PBS) inside rabbit aorta (ex vivo model). The helical robot is magnetica...

Automatic Inference of Rat's Hindlimb Trajectory to Synchronize with Forelimb Gait Through Phase.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Synchronous forelimb-hindlimb gait pattern is important to facilitate natural walking behavior of an injured rat with total transection. Since our ultimate research goal is to build a rehabilitation robotic system to simulate the natural walking patt...

Assessment of Laboratory Mouse Activity in Video Recordings Using Deep Learning Methods.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Analysis of laboratory animal behavior allows assessment of animal wellbeing. We present a method for the classification of different activities of laboratory mice by analyzing video clips using three deep learning methods. Animals placed in observat...

2D Wavelet Scalogram Training of Deep Convolutional Neural Network for Automatic Identification of Micro-Scale Sharp Wave Biomarkers in the Hypoxic-Ischemic EEG of Preterm Sheep.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
We have recently demonstrated that micro-scale Sharp waves in the first few hours EEG of asphyxiated preterm fetal sheep models are the reliable prognostic biomarkers for Hypoxic-Ischemic Encephalopathy (HIE). Higher number of sharp waves within the ...

Classification of radiographic lung pattern based on texture analysis and machine learning.

Journal of veterinary science
This study evaluated the feasibility of using texture analysis and machine learning to distinguish radiographic lung patterns. A total of 1200 regions of interest (ROIs) including four specific lung patterns (normal, alveolar, bronchial, and unstruct...

An End-to-end System for Automatic Characterization of Iba1 Immunopositive Microglia in Whole Slide Imaging.

Neuroinformatics
Traumatic brain injury (TBI) is one of the leading causes of death and disability worldwide. Detailed studies of the microglial response after TBI require high throughput quantification of changes in microglial count and morphology in histological se...

Automated Metadata Suggestion During Repository Submission.

Neuroinformatics
Knowledge discovery via an informatics resource is constrained by the completeness of the resource, both in terms of the amount of data it contains and in terms of the metadata that exists to describe the data. Increasing completeness in one of these...