AIMC Topic: Computer Simulation

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Recent advances and prospects of computational methods for metabolite identification: a review with emphasis on machine learning approaches.

Briefings in bioinformatics
Metabolomics involves studies of a great number of metabolites, which are small molecules present in biological systems. They play a lot of important functions such as energy transport, signaling, building block of cells and inhibition/catalysis. Und...

Cost-aware active learning for named entity recognition in clinical text.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Active Learning (AL) attempts to reduce annotation cost (ie, time) by selecting the most informative examples for annotation. Most approaches tacitly (and unrealistically) assume that the cost for annotating each sample is identical. This ...

Applying machine learning to predict real-world individual treatment effects: insights from a virtual patient cohort.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: We aimed to investigate bias in applying machine learning to predict real-world individual treatment effects.

Artificial Intelligent Model With Neural Network Machine Learning for the Diagnosis of Orthognathic Surgery.

The Journal of craniofacial surgery
Diagnosis and treatment planning are the most important steps in the orthognathic surgery for the successful treatment. The purpose of this study was to develop a new artificial intelligent model for surgery/non-surgery decision and extraction determ...

Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases.

Briefings in bioinformatics
The identification of interactions between drugs/compounds and their targets is crucial for the development of new drugs. In vitro screening experiments (i.e. bioassays) are frequently used for this purpose; however, experimental approaches are insuf...

A review of computational models of basic rule learning: The neural-symbolic debate and beyond.

Psychonomic bulletin & review
We present a critical review of computational models of generalization of simple grammar-like rules, such as ABA and ABB. In particular, we focus on models attempting to account for the empirical results of Marcus et al. (Science, 283(5398), 77-80 19...

Multi-omics integration-a comparison of unsupervised clustering methodologies.

Briefings in bioinformatics
With the recent developments in the field of multi-omics integration, the interest in factors such as data preprocessing, choice of the integration method and the number of different omics considered had increased. In this work, the impact of these f...

Estimation of Sparse VAR Models with Artificial Neural Networks for the Analysis of Biosignals.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference
Vector autoregressive models (VAR models) are often used to model and to analyze multivariate time series, especially to provide short-term forecasts. A common method of estimating coefficients of these VAR models is solving the Yule- Walker equation...