AIMC Topic: Data Mining

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Drug-Drug Interaction Extraction via Convolutional Neural Networks.

Computational and mathematical methods in medicine
Drug-drug interaction (DDI) extraction as a typical relation extraction task in natural language processing (NLP) has always attracted great attention. Most state-of-the-art DDI extraction systems are based on support vector machines (SVM) with a lar...

ChemTok: A New Rule Based Tokenizer for Chemical Named Entity Recognition.

BioMed research international
Named Entity Recognition (NER) from text constitutes the first step in many text mining applications. The most important preliminary step for NER systems using machine learning approaches is tokenization where raw text is segmented into tokens. This ...

A novel behavioral model of the pasture-based dairy cow from GPS data using data mining and machine learning techniques.

Journal of dairy science
A better understanding of the behavior of individual grazing dairy cattle will assist in improving productivity and welfare. Global positioning systems (GPS) applied to cows could provide a means of monitoring grazing herds while overcoming the subst...

Prototype-based models in machine learning.

Wiley interdisciplinary reviews. Cognitive science
An overview is given of prototype-based models in machine learning. In this framework, observations, i.e., data, are stored in terms of typical representatives. Together with a suitable measure of similarity, the systems can be employed in the contex...

Harnessing information from injury narratives in the 'big data' era: understanding and applying machine learning for injury surveillance.

Injury prevention : journal of the International Society for Child and Adolescent Injury Prevention
OBJECTIVE: Vast amounts of injury narratives are collected daily and are available electronically in real time and have great potential for use in injury surveillance and evaluation. Machine learning algorithms have been developed to assist in identi...

Digital Family History Data Mining with Neural Networks: A Pilot Study.

Perspectives in health information management
Following the passage of the Health Information Technology for Economic and Clinical Health (HITECH) Act of 2009, electronic health records were widely adopted by eligible physicians and hospitals in the United States. Stage 2 meaningful use menu obj...

A numerical similarity approach for using retired Current Procedural Terminology (CPT) codes for electronic phenotyping in the Scalable Collaborative Infrastructure for a Learning Health System (SCILHS).

BMC medical informatics and decision making
BACKGROUND: Interoperable phenotyping algorithms, needed to identify patient cohorts meeting eligibility criteria for observational studies or clinical trials, require medical data in a consistent structured, coded format. Data heterogeneity limits s...

Extraction of Protein-Protein Interaction from Scientific Articles by Predicting Dominant Keywords.

BioMed research international
For the automatic extraction of protein-protein interaction information from scientific articles, a machine learning approach is useful. The classifier is generated from training data represented using several features to decide whether a protein pai...

Machine learning to assist risk-of-bias assessments in systematic reviews.

International journal of epidemiology
BACKGROUND: Risk-of-bias assessments are now a standard component of systematic reviews. At present, reviewers need to manually identify relevant parts of research articles for a set of methodological elements that affect the risk of bias, in order t...

Towards Extracting Supporting Information About Predicted Protein-Protein Interactions.

IEEE/ACM transactions on computational biology and bioinformatics
One of the goals of relation extraction is to identify protein-protein interactions (PPIs) in biomedical literature. Current systems are capturing binary relations and also the direction and type of an interaction. Besides assisting in the curation P...