AIMC Topic: Data Mining

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Advanced Data Analytics for Clinical Research Part I: What are the Tools?

Innovations (Philadelphia, Pa.)
The concept of Big Data is changing the way that clinical research can be performed. Cardiothoracic surgeons need to understand the dynamic digital transformation taking place in the healthcare industry. In the last decade, technological advances and...

Harnessing Population Pedigree Data and Machine Learning Methods to Identify Patterns of Familial Bladder Cancer Risk.

Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology
BACKGROUND: Relatives of patients with bladder cancer have been shown to be at increased risk for kidney, lung, thyroid, and cervical cancer after correcting for smoking-related behaviors that may concentrate in some families. We demonstrate a novel ...

Healthcare pathway discovery and probabilistic machine learning.

International journal of medical informatics
BACKGROUND AND PURPOSE: Healthcare pathways define the execution sequence of clinical activities as patients move through a treatment process, and they are critical for maintaining quality of care. The aim of this study is to combine healthcare pathw...

Intelligent system based on data mining techniques for prediction of preterm birth for women with cervical cerclage.

Computational biology and chemistry
Preterm birth, defined as a delivery before 37 weeks' gestation, continues to affect 8-15% of all pregnancies and is associated with significant neonatal morbidity and mortality. Effective prediction of timing of delivery among women identified to be...

Attention guided capsule networks for chemical-protein interaction extraction.

Journal of biomedical informatics
The biomedical literature contains a sufficient number of chemical-protein interactions (CPIs). Automatic extraction of CPI is a crucial task in the biomedical domain, which has excellent benefits for precision medicine, drug discovery and basic biom...

Assessing the Heterogeneity of Complaints Related to Tinnitus and Hyperacusis from an Unsupervised Machine Learning Approach: An Exploratory Study.

Audiology & neuro-otology
INTRODUCTION: Subjective tinnitus (ST) and hyperacusis (HA) are common auditory symptoms that may become incapacitating in a subgroup of patients who thereby seek medical advice. Both conditions can result from many different mechanisms, and as a con...

DTranNER: biomedical named entity recognition with deep learning-based label-label transition model.

BMC bioinformatics
BACKGROUND: Biomedical named-entity recognition (BioNER) is widely modeled with conditional random fields (CRF) by regarding it as a sequence labeling problem. The CRF-based methods yield structured outputs of labels by imposing connectivity between ...

Biomedical event extraction with a novel combination strategy based on hybrid deep neural networks.

BMC bioinformatics
BACKGROUND: Biomedical event extraction is a fundamental and in-demand technology that has attracted substantial interest from many researchers. Previous works have heavily relied on manual designed features and external NLP packages in which the fea...