AIMC Topic: Deep Learning

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Parametric-MAA: fast, object-centric avoidance of metal artifacts for intraoperative CBCT.

International journal of computer assisted radiology and surgery
PURPOSE: Metal artifacts remain a persistent issue in intraoperative CBCT imaging. Particularly in orthopedic and trauma applications, these artifacts obstruct clinically relevant areas around the implant, reducing the modality's clinical value. Meta...

Open-source deep-learning models for segmentation of normal structures for prostatic and gynecological high-dose-rate brachytherapy: Comparison of architectures.

Journal of applied clinical medical physics
BACKGROUND: The use of deep learning-based auto-contouring algorithms in various treatment planning services is increasingly common. There is a notable deficit of commercially or publicly available models trained on large or diverse datasets containi...

Unsupervised brain MRI tumour segmentation via two-stage image synthesis.

Medical image analysis
Deep learning shows promise in automated brain tumour segmentation, but it depends on costly expert annotations. Recent advances in unsupervised learning offer an alternative by using synthetic data for training. However, the discrepancy between real...

A novel deep learning-based floating garbage detection approach and its effectiveness evaluation in environmentally sustainable development.

Journal of environmental management
Floating garbage removal is an essential environmental strategy to reduce water pollution and achieve environmental sustainability, and it is a pressing issue for global ecological restoration. Under the interference of complex environments, floating...

Joint identification of hydraulic conductivity and groundwater pollution sources using unscented Kalman smoother with multiple data assimilation and deep learning.

Ecotoxicology and environmental safety
Identification of groundwater pollution sources (IGPSs) is a prerequisite for pollution remediation and pollution risk prediction. Data assimilation approaches have been used extensively in IGPSs field in recent years. A data assimilation approach-un...

Deep Learning-Based Comparative Prediction and Functional Analysis of Intrinsically Disordered Regions in SARS-CoV-2.

International journal of molecular sciences
This study explores the role of intrinsically disordered regions (IDRs) in the SARS-CoV-2 proteome and their potential as targets for small-molecule drug discovery. Experimentally validated intrinsic disordered regions from the literature were utiliz...

CGLoop: a neural network framework for chromatin loop prediction.

BMC genomics
BACKGROUND: Chromosomes of species exhibit a variety of high-dimensional organizational features, and chromatin loops, which are fundamental structures in the three-dimensional (3D) structure of the genome. Chromatin loops are visible speckled patter...

TransBind allows precise detection of DNA-binding proteins and residues using language models and deep learning.

Communications biology
Identifying DNA-binding proteins and their binding residues is critical for understanding diverse biological processes, but conventional experimental approaches are slow and costly. Existing machine learning methods, while faster, often lack accuracy...

Evaluation of a deep learning segmentation tool to help detect spinal cord lesions from combined T2 and STIR acquisitions in people with multiple sclerosis.

European radiology
OBJECTIVE: To develop a deep learning (DL) model for the detection of spinal cord (SC) multiple sclerosis (MS) lesions from both sagittal T2 and short tau inversion recovery (STIR) sequences and to investigate whether such a model could improve the p...