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Escherichia coli

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Assessing the risk of E. coli contamination from manure application in Chinese farmland by integrating machine learning and Phydrus.

Environmental pollution (Barking, Essex : 1987)
This study aims to present a comprehensive study on the risks associated with the residual presence and transport of Escherichia coli (E. coli) in soil following the application of livestock manure in Chinese farmlands by integrating machine learning...

Nonlinear classifiers for wet-neuromorphic computing using gene regulatory neural network.

Biophysical reports
The gene regulatory network (GRN) of biological cells governs a number of key functionalities that enable them to adapt and survive through different environmental conditions. Close observation of the GRN shows that the structure and operational prin...

Random forest differentiation of Escherichia coli in elderly sepsis using biomarkers and infectious sites.

Scientific reports
This study addresses the challenge of accurately diagnosing sepsis subtypes in elderly patients, particularly distinguishing between Escherichia coli (E. coli) and non-E. coli infections. Utilizing machine learning, we conducted a retrospective analy...

Data-driven learning of structure augments quantitative prediction of biological responses.

PLoS computational biology
Multi-factor screenings are commonly used in diverse applications in medicine and bioengineering, including optimizing combination drug treatments and microbiome engineering. Despite the advances in high-throughput technologies, large-scale experimen...

Using machine learning models to estimate Escherichia coli concentration in an irrigation pond from water quality and drone-based RGB imagery data.

Water research
The rapid and efficient quantification of Escherichia coli concentrations is crucial for monitoring water quality. Remote sensing techniques and machine learning algorithms have been used to detect E. coli in water and estimate its concentrations. Th...

Electrochemical platform for detecting Escherichia coli bacteria using machine learning methods.

Biosensors & bioelectronics
We present an electrochemical platform designed to reduce time of Escherichia coli bacteria detection from 24 to 48-h to 30 min. The presented approach is based on a system which includes gallium-indium (eGaIn) alloy to provide conductivity and a hyd...

Machine Learning Models Identify Inhibitors of New Delhi Metallo-β-lactamase.

Journal of chemical information and modeling
The worldwide spread of the metallo-β-lactamases (MBL), especially New Delhi metallo-β-lactamase-1 (NDM-1), is threatening the efficacy of β-lactams, which are the most potent and prescribed class of antibiotics in the clinic. Currently, FDA-approved...

Identifying and characterization of novel broad-spectrum bacteriocins from the Shanxi aged vinegar microbiome: Machine learning, molecular simulation, and activity validation.

International journal of biological macromolecules
Shanxi aged vinegar microbiome encodes a wide variety of bacteriocins. The aim of this study was to mine, screen and characterize novel broad-spectrum bacteriocins from the large-scale microbiome data of Shanxi aged vinegar through machine learning, ...

Magnetic Microrobot Swarms with Polymeric Hands Catching Bacteria and Microplastics in Water.

ACS nano
The forefront of micro- and nanorobot research involves the development of smart swimming micromachines emulating the complexity of natural systems, such as the swarming and collective behaviors typically observed in animals and microorganisms, for e...