AIMC Topic: Pattern Recognition, Automated

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DKADE: a novel framework based on deep learning and knowledge graph for identifying adverse drug events and related medications.

Briefings in bioinformatics
Adverse drug events (ADEs) are common in clinical practice and can cause significant harm to patients and increase resource use. Natural language processing (NLP) has been applied to automate ADE detection, but NLP systems become less adaptable when ...

KG-Hub-building and exchanging biological knowledge graphs.

Bioinformatics (Oxford, England)
MOTIVATION: Knowledge graphs (KGs) are a powerful approach for integrating heterogeneous data and making inferences in biology and many other domains, but a coherent solution for constructing, exchanging, and facilitating the downstream use of KGs is...

TRSRD: a database for research on risky substances in tea using natural language processing and knowledge graph-based techniques.

Database : the journal of biological databases and curation
During the production and processing of tea, harmful substances are often introduced. However, they have never been systematically integrated, and it is impossible to understand the harmful substances that may be introduced during tea production and ...

A lightweight CNN-based knowledge graph embedding model with channel attention for link prediction.

Mathematical biosciences and engineering : MBE
Knowledge graph (KG) embedding is to embed the entities and relations of a KG into a low-dimensional continuous vector space while preserving the intrinsic semantic associations between entities and relations. One of the most important applications o...

A multimodal fusion enabled ensemble approach for human activity recognition in smart homes.

Health informatics journal
How to deal with multi-modality data from different types of devices is a challenging issue for accurate recognition of human activities in a smart environment. In this paper, we propose a multimodal fusion enabled ensemble approach. Firstly, useful ...

SVM classifier of cervical histopathology images based on texture and morphological features.

Technology and health care : official journal of the European Society for Engineering and Medicine
BACKGROUND: Cervical histopathology image classification is a crucial indicator in cervical biopsy results.

A review of biomedical datasets relating to drug discovery: a knowledge graph perspective.

Briefings in bioinformatics
Drug discovery and development is a complex and costly process. Machine learning approaches are being investigated to help improve the effectiveness and speed of multiple stages of the drug discovery pipeline. Of these, those that use Knowledge Graph...

Implications of topological imbalance for representation learning on biomedical knowledge graphs.

Briefings in bioinformatics
Adoption of recently developed methods from machine learning has given rise to creation of drug-discovery knowledge graphs (KGs) that utilize the interconnected nature of the domain. Graph-based modelling of the data, combined with KG embedding (KGE)...

BioDKG-DDI: predicting drug-drug interactions based on drug knowledge graph fusing biochemical information.

Briefings in functional genomics
The way of co-administration of drugs is a sensible strategy for treating complex diseases efficiently. Because of existing massive unknown interactions among drugs, predicting potential adverse drug-drug interactions (DDIs) accurately is promotive t...

Attention-based Knowledge Graph Representation Learning for Predicting Drug-drug Interactions.

Briefings in bioinformatics
Drug-drug interactions (DDIs) are known as the main cause of life-threatening adverse events, and their identification is a key task in drug development. Existing computational algorithms mainly solve this problem by using advanced representation lea...