AIMC Topic: Software

Clear Filters Showing 201 to 210 of 3675 articles

A Tutorial on the Use of Artificial Intelligence Tools for Facial Emotion Recognition in R.

Multivariate behavioral research
Automated detection of facial emotions has been an interesting topic for multiple decades in social and behavioral research but is only possible very recently. In this tutorial, we review three popular artificial intelligence based emotion detection ...

PhageDPO: A machine-learning based computational framework for identifying phage depolymerases.

Computers in biology and medicine
Bacteriophages (phages) are the most predominant and genetically diverse biological entities on Earth. Phages are viruses that infect bacteria and encode numerous proteins with potential biotechnological application. However, most phage-encoded prote...

Evaluation and failure analysis of four commercial deep learning-based autosegmentation software for abdominal organs at risk.

Journal of applied clinical medical physics
PURPOSE: Deep learning-based segmentation of organs-at-risk (OAR) is emerging to become mainstream in clinical practice because of the superior performance over atlas and model-based autocontouring methods. While several commercial deep learning-base...

scCobra allows contrastive cell embedding learning with domain adaptation for single cell data integration and harmonization.

Communications biology
The rapid advancement of single-cell technologies has created an urgent need for effective methods to integrate and harmonize single-cell data. Technical and biological variations across studies complicate data integration, while conventional tools o...

Predicting software reuse using machine learning techniques-A case study on open-source Java software systems.

PloS one
Software reuse is an essential practice to increase efficiency and reduce costs in software production. Software reuse practices range from reusing artifacts, libraries, components, packages, and APIs. Identifying suitable software for reuse requires...

FakET: Simulating cryo-electron tomograms with neural style transfer.

Structure (London, England : 1993)
In cryo-electron microscopy, accurate particle localization and classification are imperative. Recent deep learning solutions, though successful, require extensive training datasets. The protracted generation time of physics-based models, often emplo...

Self-supervised machine learning methods for protein design improve sampling but not the identification of high-fitness variants.

Science advances
Machine learning (ML) is changing the world of computational protein design, with data-driven methods surpassing biophysical-based methods in experimental success. However, they are most often reported as case studies, lack integration and standardiz...

PhysioEx: a new Python library for explainable sleep staging through deep learning.

Physiological measurement
Sleep staging is a crucial task in clinical and research contexts for diagnosing and understanding sleep disorders. This work introduces PhysioEx (Physiological Signal Explainer), a Python library designed to support the analysis of sleep stages usin...

A Systematic Study of Popular Software Packages and AI/ML Models for Calibrating In Situ Air Quality Data: An Example with Purple Air Sensors.

Sensors (Basel, Switzerland)
Accurate air pollution monitoring is critical to understand and mitigate the impacts of air pollution on human health and ecosystems. Due to the limited number and geographical coverage of advanced, highly accurate sensors monitoring air pollutants, ...

GNOme, an ontology for glycan naming and subsumption.

Analytical and bioanalytical chemistry
While GlyTouCan provides stable identifiers for referencing glycan structures, they are not organized semantically. GNOme, a glycan naming and subsumption ontology and a member of the OBOFoundry, organizes GlyTouCan accessions for automated reasoning...