AIMC Topic: Software

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A robot for high yield electrophysiology and morphology of single neurons in vivo.

Nature communications
Single-cell characterization and perturbation of neurons provides knowledge critical to addressing fundamental neuroscience questions including the structure-function relationship and neuronal cell-type classification. Here we report a robot for effi...

ROS-IGTL-Bridge: an open network interface for image-guided therapy using the ROS environment.

International journal of computer assisted radiology and surgery
PURPOSE: With the growing interest in advanced image-guidance for surgical robot systems, rapid integration and testing of robotic devices and medical image computing software are becoming essential in the research and development. Maximizing the use...

Hybridizing Feature Selection and Feature Learning Approaches in QSAR Modeling for Drug Discovery.

Scientific reports
Quantitative structure-activity relationship modeling using machine learning techniques constitutes a complex computational problem, where the identification of the most informative molecular descriptors for predicting a specific target property play...

CarcinoPred-EL: Novel models for predicting the carcinogenicity of chemicals using molecular fingerprints and ensemble learning methods.

Scientific reports
Carcinogenicity refers to a highly toxic end point of certain chemicals, and has become an important issue in the drug development process. In this study, three novel ensemble classification models, namely Ensemble SVM, Ensemble RF, and Ensemble XGBo...

NFPscanner: a webtool for knowledge-based deciphering of biomedical networks.

BMC bioinformatics
BACKGROUND: Many biological pathways have been created to represent different types of knowledge, such as genetic interactions, metabolic reactions, and gene-regulating and physical-binding relationships. Biologists are using a wide range of omics da...

Mastery Learning - does the method of learning make a difference in skills acquisition for robotic surgery?

The international journal of medical robotics + computer assisted surgery : MRCAS
BACKGROUND: Few studies compare the effectiveness of blocked vs random practice conditions in minimally invasive surgery training, and none have evaluated these in robotic surgery training.

A fuzzy logic-based tool to assess beef cattle ranching sustainability in complex environmental systems.

Journal of environmental management
One of the most relevant issues in discussion worldwide nowadays is the concept of sustainability. However, sustainability assessment is a difficult task due to the complexity of factors involved in the natural world added to the human interference. ...

Canary: An NLP Platform for Clinicians and Researchers.

Applied clinical informatics
Information Extraction methods can help discover critical knowledge buried in the vast repositories of unstructured clinical data. However, these methods are underutilized in clinical research, potentially due to the absence of free software geared t...

A shallow convolutional neural network for blind image sharpness assessment.

PloS one
Blind image quality assessment can be modeled as feature extraction followed by score prediction. It necessitates considerable expertise and efforts to handcraft features for optimal representation of perceptual image quality. This paper addresses bl...

Tool-supported Interactive Correction and Semantic Annotation of Narrative Clinical Reports.

Methods of information in medicine
OBJECTIVES: Our main objective is to design a method of, and supporting software for, interactive correction and semantic annotation of narrative clinical reports, which would allow for their easier and less erroneous processing outside their origina...