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Time-Lapse Imaging

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Deep learning neural network analysis of human blastocyst expansion from time-lapse image files.

Reproductive biomedicine online
RESEARCH QUESTION: Can artificial intelligence (AI) discriminate a blastocyst's cellular area from unedited time-lapse image files using semantic segmentation and a deep learning optimized U-Net architecture for use in selecting single blastocysts fo...

3DeeCellTracker, a deep learning-based pipeline for segmenting and tracking cells in 3D time lapse images.

eLife
Despite recent improvements in microscope technologies, segmenting and tracking cells in three-dimensional time-lapse images (3D + T images) to extract their dynamic positions and activities remains a considerable bottleneck in the field. We develope...

Development of deep learning algorithms for predicting blastocyst formation and quality by time-lapse monitoring.

Communications biology
Approaches to reliably predict the developmental potential of embryos and select suitable embryos for blastocyst culture are needed. The development of time-lapse monitoring (TLM) and artificial intelligence (AI) may help solve this problem. Here, we...

Review of computer vision application in in vitro fertilization: the application of deep learning-based computer vision technology in the world of IVF.

Journal of assisted reproduction and genetics
In vitro fertilization has been regarded as a forefront solution in treating infertility for over four decades, yet its effectiveness has remained relatively low. This could be attributed to the lack of advancements for the method of observing and se...

End-to-end deep learning for recognition of ploidy status using time-lapse videos.

Journal of assisted reproduction and genetics
PURPOSE: Our retrospective study is to investigate an end-to-end deep learning model in identifying ploidy status through raw time-lapse video.

Recursive Deep Prior Video: A super resolution algorithm for time-lapse microscopy of organ-on-chip experiments.

Medical image analysis
Biological experiments based on organ-on-chips (OOCs) exploit light Time-Lapse Microscopy (TLM) for a direct observation of cell movement that is an observable signature of underlying biological processes. A high spatial resolution is essential to ca...

Adaptive adversarial neural networks for the analysis of lossy and domain-shifted datasets of medical images.

Nature biomedical engineering
In machine learning for image-based medical diagnostics, supervised convolutional neural networks are typically trained with large and expertly annotated datasets obtained using high-resolution imaging systems. Moreover, the network's performance can...

Automatic improvement of deep learning-based cell segmentation in time-lapse microscopy by neural architecture search.

Bioinformatics (Oxford, England)
MOTIVATION: Live cell segmentation is a crucial step in biological image analysis and is also a challenging task because time-lapse microscopy cell sequences usually exhibit complex spatial structures and complicated temporal behaviors. In recent yea...