AIMC Topic: Automation

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Machine learning derived segmentation of phase velocity encoded cardiovascular magnetic resonance for fully automated aortic flow quantification.

Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance
BACKGROUND: Phase contrast (PC) cardiovascular magnetic resonance (CMR) is widely employed for flow quantification, but analysis typically requires time consuming manual segmentation which can require human correction. Advances in machine learning ha...

Automated, machine learning-based, 3D echocardiographic quantification of left ventricular mass.

Echocardiography (Mount Kisco, N.Y.)
BACKGROUND: Although 3D echocardiography (3DE) circumvents many limitations of 2D echocardiography by allowing direct measurements of left ventricular (LV) mass, it is seldom used in clinical practice due to time-consuming analysis. A recently develo...

MILD-Net: Minimal information loss dilated network for gland instance segmentation in colon histology images.

Medical image analysis
The analysis of glandular morphology within colon histopathology images is an important step in determining the grade of colon cancer. Despite the importance of this task, manual segmentation is laborious, time-consuming and can suffer from subjectiv...

Fast animal pose estimation using deep neural networks.

Nature methods
The need for automated and efficient systems for tracking full animal pose has increased with the complexity of behavioral data and analyses. Here we introduce LEAP (LEAP estimates animal pose), a deep-learning-based method for predicting the positio...

AnatomyNet: Deep learning for fast and fully automated whole-volume segmentation of head and neck anatomy.

Medical physics
PURPOSE: Radiation therapy (RT) is a common treatment option for head and neck (HaN) cancer. An important step involved in RT planning is the delineation of organs-at-risks (OARs) based on HaN computed tomography (CT). However, manually delineating O...

CT liver tumor segmentation hybrid approach using neutrosophic sets, fast fuzzy c-means and adaptive watershed algorithm.

Artificial intelligence in medicine
Liver tumor segmentation from computed tomography (CT) images is a critical and challenging task. Due to the fuzziness in the liver pixel range, the neighboring organs of the liver with the same intensity, high noise and large variance of tumors. The...

Structured illumination microscopy combined with machine learning enables the high throughput analysis and classification of virus structure.

eLife
Optical super-resolution microscopy techniques enable high molecular specificity with high spatial resolution and constitute a set of powerful tools in the investigation of the structure of supramolecular assemblies such as viruses. Here, we report o...

Tox_(R)CNN: Deep learning-based nuclei profiling tool for drug toxicity screening.

PLoS computational biology
Toxicity is an important factor in failed drug development, and its efficient identification and prediction is a major challenge in drug discovery. We have explored the potential of microscopy images of fluorescently labeled nuclei for the prediction...